e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/hgFindSpec.c src/hg/lib/hgFindSpec.c
index 094c37e..cc90450 100644
--- src/hg/lib/hgFindSpec.c
+++ src/hg/lib/hgFindSpec.c
@@ -1,197 +1,200 @@
 /* hgFindSpec.c was originally generated by the autoSql program, which also 
  * generated hgFindSpec.h and hgFindSpec.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "hgFindSpec.h"
 
 
 void hgFindSpecStaticLoad(char **row, struct hgFindSpec *ret)
 /* Load a row from hgFindSpec table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->searchName = row[0];
 ret->searchTable = row[1];
 ret->searchMethod = row[2];
 ret->searchType = row[3];
 ret->shortCircuit = sqlUnsigned(row[4]);
 ret->termRegex = row[5];
 ret->query = row[6];
 ret->xrefTable = row[7];
 ret->xrefQuery = row[8];
 ret->searchPriority = atof(row[9]);
 ret->searchDescription = row[10];
 ret->searchSettings = row[11];
 }
 
 struct hgFindSpec *hgFindSpecLoad(char **row)
 /* Load a hgFindSpec from row fetched with select * from hgFindSpec
  * from database.  Dispose of this with hgFindSpecFree(). */
 {
 struct hgFindSpec *ret;
 
 AllocVar(ret);
 ret->searchName = cloneString(row[0]);
 ret->searchTable = cloneString(row[1]);
 ret->searchMethod = cloneString(row[2]);
 ret->searchType = cloneString(row[3]);
 ret->shortCircuit = sqlUnsigned(row[4]);
 ret->termRegex = cloneString(row[5]);
 ret->query = cloneString(row[6]);
 ret->xrefTable = cloneString(row[7]);
 ret->xrefQuery = cloneString(row[8]);
 ret->searchPriority = atof(row[9]);
 ret->searchDescription = cloneString(row[10]);
 ret->searchSettings = cloneString(row[11]);
 return ret;
 }
 
 struct hgFindSpec *hgFindSpecLoadAll(char *fileName) 
 /* Load all hgFindSpec from a whitespace-separated file.
  * Dispose of this with hgFindSpecFreeList(). */
 {
 struct hgFindSpec *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[12];
 
 while (lineFileRow(lf, row))
     {
     el = hgFindSpecLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct hgFindSpec *hgFindSpecLoadAllByChar(char *fileName, char chopper) 
 /* Load all hgFindSpec from a chopper separated file.
  * Dispose of this with hgFindSpecFreeList(). */
 {
 struct hgFindSpec *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[12];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = hgFindSpecLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct hgFindSpec *hgFindSpecCommaIn(char **pS, struct hgFindSpec *ret)
 /* Create a hgFindSpec out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new hgFindSpec */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->searchName = sqlStringComma(&s);
 ret->searchTable = sqlStringComma(&s);
 ret->searchMethod = sqlStringComma(&s);
 ret->searchType = sqlStringComma(&s);
 ret->shortCircuit = sqlUnsignedComma(&s);
 ret->termRegex = sqlStringComma(&s);
 ret->query = sqlStringComma(&s);
 ret->xrefTable = sqlStringComma(&s);
 ret->xrefQuery = sqlStringComma(&s);
 ret->searchPriority = sqlFloatComma(&s);
 ret->searchDescription = sqlStringComma(&s);
 ret->searchSettings = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void hgFindSpecFree(struct hgFindSpec **pEl)
 /* Free a single dynamically allocated hgFindSpec such as created
  * with hgFindSpecLoad(). */
 {
 struct hgFindSpec *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->searchName);
 freeMem(el->searchTable);
 freeMem(el->searchMethod);
 freeMem(el->searchType);
 freeMem(el->termRegex);
 freeMem(el->query);
 freeMem(el->xrefTable);
 freeMem(el->xrefQuery);
 freeMem(el->searchDescription);
 freeMem(el->searchSettings);
 freez(pEl);
 }
 
 void hgFindSpecFreeList(struct hgFindSpec **pList)
 /* Free a list of dynamically allocated hgFindSpec's */
 {
 struct hgFindSpec *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     hgFindSpecFree(&el);
     }
 *pList = NULL;
 }
 
 void hgFindSpecOutput(struct hgFindSpec *el, FILE *f, char sep, char lastSep) 
 /* Print out hgFindSpec.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->searchName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->searchTable);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->searchMethod);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->searchType);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->shortCircuit);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->termRegex);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->query);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->xrefTable);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->xrefQuery);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->searchPriority);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->searchDescription);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->searchSettings);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */