e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/itemConf.c src/hg/lib/itemConf.c
index 510ea48..4dbd8ab 100644
--- src/hg/lib/itemConf.c
+++ src/hg/lib/itemConf.c
@@ -1,125 +1,128 @@
 /* itemConf.c was originally generated by the autoSql program, which also 
  * generated itemConf.h and itemConf.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "itemConf.h"
 
 
 void itemConfStaticLoad(char **row, struct itemConf *ret)
 /* Load a row from itemConf table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->id = row[0];
 ret->probability = sqlFloat(row[1]);
 ret->fdr = sqlFloat(row[2]);
 }
 
 struct itemConf *itemConfLoad(char **row)
 /* Load a itemConf from row fetched with select * from itemConf
  * from database.  Dispose of this with itemConfFree(). */
 {
 struct itemConf *ret;
 
 AllocVar(ret);
 ret->id = cloneString(row[0]);
 ret->probability = sqlFloat(row[1]);
 ret->fdr = sqlFloat(row[2]);
 return ret;
 }
 
 struct itemConf *itemConfLoadAll(char *fileName) 
 /* Load all itemConf from a whitespace-separated file.
  * Dispose of this with itemConfFreeList(). */
 {
 struct itemConf *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[3];
 
 while (lineFileRow(lf, row))
     {
     el = itemConfLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct itemConf *itemConfLoadAllByChar(char *fileName, char chopper) 
 /* Load all itemConf from a chopper separated file.
  * Dispose of this with itemConfFreeList(). */
 {
 struct itemConf *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[3];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = itemConfLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct itemConf *itemConfCommaIn(char **pS, struct itemConf *ret)
 /* Create a itemConf out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new itemConf */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->id = sqlStringComma(&s);
 ret->probability = sqlFloatComma(&s);
 ret->fdr = sqlFloatComma(&s);
 *pS = s;
 return ret;
 }
 
 void itemConfFree(struct itemConf **pEl)
 /* Free a single dynamically allocated itemConf such as created
  * with itemConfLoad(). */
 {
 struct itemConf *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->id);
 freez(pEl);
 }
 
 void itemConfFreeList(struct itemConf **pList)
 /* Free a list of dynamically allocated itemConf's */
 {
 struct itemConf *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     itemConfFree(&el);
     }
 *pList = NULL;
 }
 
 void itemConfOutput(struct itemConf *el, FILE *f, char sep, char lastSep) 
 /* Print out itemConf.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->id);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%g", el->probability);
 fputc(sep,f);
 fprintf(f, "%g", el->fdr);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */