e70152e44cc66cc599ff6b699eb8adc07f3e656a kent Sat May 24 21:09:34 2014 -0700 Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment. diff --git src/hg/lib/mapSts.c src/hg/lib/mapSts.c index c53680e..9358157 100644 --- src/hg/lib/mapSts.c +++ src/hg/lib/mapSts.c @@ -1,132 +1,135 @@ /* mapSts.c was originally generated by the autoSql program, which also * generated mapSts.h and mapSts.sql. This module links the database and the RAM * representation of objects. */ +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + #include "common.h" #include "jksql.h" #include "mapSts.h" void mapStsStaticLoad(char **row, struct mapSts *ret) /* Load a row from mapSts table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->chrom = row[0]; ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = row[3]; ret->score = sqlUnsigned(row[4]); ret->identNo = sqlUnsigned(row[5]); ret->rhChrom = row[6]; ret->distance = atof(row[7]); ret->ctgAcc = row[8]; ret->otherAcc = row[9]; } struct mapSts *mapStsLoad(char **row) /* Load a mapSts from row fetched with select * from mapSts * from database. Dispose of this with mapStsFree(). */ { struct mapSts *ret; AllocVar(ret); ret->chrom = cloneString(row[0]); ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = cloneString(row[3]); ret->score = sqlUnsigned(row[4]); ret->identNo = sqlUnsigned(row[5]); ret->rhChrom = cloneString(row[6]); ret->distance = atof(row[7]); ret->ctgAcc = cloneString(row[8]); ret->otherAcc = cloneString(row[9]); return ret; } struct mapSts *mapStsCommaIn(char **pS, struct mapSts *ret) /* Create a mapSts out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new mapSts */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); ret->score = sqlUnsignedComma(&s); ret->identNo = sqlUnsignedComma(&s); ret->rhChrom = sqlStringComma(&s); ret->distance = sqlSignedComma(&s); ret->ctgAcc = sqlStringComma(&s); ret->otherAcc = sqlStringComma(&s); *pS = s; return ret; } void mapStsFree(struct mapSts **pEl) /* Free a single dynamically allocated mapSts such as created * with mapStsLoad(). */ { struct mapSts *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freeMem(el->rhChrom); freeMem(el->ctgAcc); freeMem(el->otherAcc); freez(pEl); } void mapStsFreeList(struct mapSts **pList) /* Free a list of dynamically allocated mapSts's */ { struct mapSts *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; mapStsFree(&el); } *pList = NULL; } void mapStsOutput(struct mapSts *el, FILE *f, char sep, char lastSep) /* Print out mapSts. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->score); fputc(sep,f); fprintf(f, "%u", el->identNo); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->rhChrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%f", el->distance); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->ctgAcc); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->otherAcc); if (sep == ',') fputc('"',f); fputc(lastSep,f); }