e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/mgiID.c src/hg/lib/mgiID.c
index b21df86..ebd98c1 100644
--- src/hg/lib/mgiID.c
+++ src/hg/lib/mgiID.c
@@ -1,139 +1,142 @@
 /* mgiID.c was originally generated by the autoSql program, which also 
  * generated mgiID.h and mgiID.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "mgiID.h"
 
 
 void MGIidStaticLoad(char **row, struct MGIid *ret)
 /* Load a row from MGIid table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 int sizeOne,i;
 char *s;
 
 strcpy(ret->LLid, row[0]);
 strcpy(ret->MGIid, row[1]);
 strcpy(ret->symbol, row[2]);
 }
 
 struct MGIid *MGIidLoad(char **row)
 /* Load a MGIid from row fetched with select * from MGIid
  * from database.  Dispose of this with MGIidFree(). */
 {
 struct MGIid *ret;
 int sizeOne,i;
 char *s;
 
 AllocVar(ret);
 strcpy(ret->LLid, row[0]);
 strcpy(ret->MGIid, row[1]);
 strcpy(ret->symbol, row[2]);
 return ret;
 }
 
 struct MGIid *MGIidLoadAll(char *fileName) 
 /* Load all MGIid from a tab-separated file.
  * Dispose of this with MGIidFreeList(). */
 {
 struct MGIid *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[3];
 
 while (lineFileRow(lf, row))
     {
     el = MGIidLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct MGIid *MGIidLoadWhere(struct sqlConnection *conn, char *table, char *where)
 /* Load all MGIid from table that satisfy where clause. The
  * where clause may be NULL in which case whole table is loaded
  * Dispose of this with MGIidFreeList(). */
 {
 struct MGIid *list = NULL, *el;
 struct dyString *query = dyStringNew(256);
 struct sqlResult *sr;
 char **row;
 
 sqlDyStringPrintf(query, "select * from %s", table);
 if (where != NULL)
     dyStringPrintf(query, " where %s", where);
 sr = sqlGetResult(conn, query->string);
 while ((row = sqlNextRow(sr)) != NULL)
     {
     el = MGIidLoad(row);
     slAddHead(&list, el);
     }
 slReverse(&list);
 sqlFreeResult(&sr);
 dyStringFree(&query);
 return list;
 }
 
 struct MGIid *MGIidCommaIn(char **pS, struct MGIid *ret)
 /* Create a MGIid out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new MGIid */
 {
 char *s = *pS;
 int i;
 
 if (ret == NULL)
     AllocVar(ret);
 sqlFixedStringComma(&s, ret->LLid, sizeof(ret->LLid));
 sqlFixedStringComma(&s, ret->MGIid, sizeof(ret->MGIid));
 sqlFixedStringComma(&s, ret->symbol, sizeof(ret->symbol));
 *pS = s;
 return ret;
 }
 
 void MGIidFree(struct MGIid **pEl)
 /* Free a single dynamically allocated MGIid such as created
  * with MGIidLoad(). */
 {
 struct MGIid *el;
 
 if ((el = *pEl) == NULL) return;
 freez(pEl);
 }
 
 void MGIidFreeList(struct MGIid **pList)
 /* Free a list of dynamically allocated MGIid's */
 {
 struct MGIid *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     MGIidFree(&el);
     }
 *pList = NULL;
 }
 
 void MGIidOutput(struct MGIid *el, FILE *f, char sep, char lastSep) 
 /* Print out MGIid.  Separate fields with sep. Follow last field with lastSep. */
 {
 int i;
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->LLid);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->MGIid);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->symbol);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }