e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/minGeneInfo.c src/hg/lib/minGeneInfo.c
index 5d0907c..aa9b7d3 100644
--- src/hg/lib/minGeneInfo.c
+++ src/hg/lib/minGeneInfo.c
@@ -1,171 +1,174 @@
 /* minGeneInfo.c was originally generated by the autoSql program, which also 
  * generated minGeneInfo.h and minGeneInfo.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "minGeneInfo.h"
 
 
 void minGeneInfoStaticLoad(char **row, struct minGeneInfo *ret)
 /* Load a row from minGeneInfo table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->name = row[0];
 ret->gene = row[1];
 ret->product = row[2];
 ret->note = row[3];
 ret->protein = row[4];
 ret->gi = row[5];
 ret->ec = row[6];
 ret->entrezGene = row[7];
 }
 
 struct minGeneInfo *minGeneInfoLoad(char **row)
 /* Load a minGeneInfo from row fetched with select * from minGeneInfo
  * from database.  Dispose of this with minGeneInfoFree(). */
 {
 struct minGeneInfo *ret;
 
 AllocVar(ret);
 ret->name = cloneString(row[0]);
 ret->gene = cloneString(row[1]);
 ret->product = cloneString(row[2]);
 ret->note = cloneString(row[3]);
 ret->protein = cloneString(row[4]);
 ret->gi = cloneString(row[5]);
 ret->ec = cloneString(row[6]);
 ret->entrezGene = cloneString(row[7]);
 return ret;
 }
 
 struct minGeneInfo *minGeneInfoLoadAll(char *fileName) 
 /* Load all minGeneInfo from a whitespace-separated file.
  * Dispose of this with minGeneInfoFreeList(). */
 {
 struct minGeneInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[8];
 
 while (lineFileRow(lf, row))
     {
     el = minGeneInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct minGeneInfo *minGeneInfoLoadAllByChar(char *fileName, char chopper) 
 /* Load all minGeneInfo from a chopper separated file.
  * Dispose of this with minGeneInfoFreeList(). */
 {
 struct minGeneInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[8];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = minGeneInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct minGeneInfo *minGeneInfoCommaIn(char **pS, struct minGeneInfo *ret)
 /* Create a minGeneInfo out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new minGeneInfo */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->name = sqlStringComma(&s);
 ret->gene = sqlStringComma(&s);
 ret->product = sqlStringComma(&s);
 ret->note = sqlStringComma(&s);
 ret->protein = sqlStringComma(&s);
 ret->gi = sqlStringComma(&s);
 ret->ec = sqlStringComma(&s);
 ret->entrezGene = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void minGeneInfoFree(struct minGeneInfo **pEl)
 /* Free a single dynamically allocated minGeneInfo such as created
  * with minGeneInfoLoad(). */
 {
 struct minGeneInfo *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->name);
 freeMem(el->gene);
 freeMem(el->product);
 freeMem(el->note);
 freeMem(el->protein);
 freeMem(el->gi);
 freeMem(el->ec);
 freeMem(el->entrezGene);
 freez(pEl);
 }
 
 void minGeneInfoFreeList(struct minGeneInfo **pList)
 /* Free a list of dynamically allocated minGeneInfo's */
 {
 struct minGeneInfo *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     minGeneInfoFree(&el);
     }
 *pList = NULL;
 }
 
 void minGeneInfoOutput(struct minGeneInfo *el, FILE *f, char sep, char lastSep) 
 /* Print out minGeneInfo.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->gene);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->product);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->note);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->protein);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->gi);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->ec);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->entrezGene);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */