e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/rhMapInfo.c src/hg/lib/rhMapInfo.c
index d8f7947..00e0559 100644
--- src/hg/lib/rhMapInfo.c
+++ src/hg/lib/rhMapInfo.c
@@ -1,181 +1,184 @@
 /* rhMapInfo.c was originally generated by the autoSql program, which also 
  * generated rhMapInfo.h and rhMapInfo.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "rhMapInfo.h"
 
 
 void rhMapInfoStaticLoad(char **row, struct rhMapInfo *ret)
 /* Load a row from rhMapInfo table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->name = row[0];
 ret->zfinId = row[1];
 ret->linkageGp = row[2];
 ret->position = sqlUnsigned(row[3]);
 ret->distance = sqlUnsigned(row[4]);
 ret->markerType = row[5];
 ret->source = row[6];
 ret->mapSite = row[7];
 ret->leftPrimer = row[8];
 ret->rightPrimer = row[9];
 }
 
 struct rhMapInfo *rhMapInfoLoad(char **row)
 /* Load a rhMapInfo from row fetched with select * from rhMapInfo
  * from database.  Dispose of this with rhMapInfoFree(). */
 {
 struct rhMapInfo *ret;
 
 AllocVar(ret);
 ret->name = cloneString(row[0]);
 ret->zfinId = cloneString(row[1]);
 ret->linkageGp = cloneString(row[2]);
 ret->position = sqlUnsigned(row[3]);
 ret->distance = sqlUnsigned(row[4]);
 ret->markerType = cloneString(row[5]);
 ret->source = cloneString(row[6]);
 ret->mapSite = cloneString(row[7]);
 ret->leftPrimer = cloneString(row[8]);
 ret->rightPrimer = cloneString(row[9]);
 return ret;
 }
 
 struct rhMapInfo *rhMapInfoLoadAll(char *fileName) 
 /* Load all rhMapInfo from a whitespace-separated file.
  * Dispose of this with rhMapInfoFreeList(). */
 {
 struct rhMapInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[10];
 
 while (lineFileRow(lf, row))
     {
     el = rhMapInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct rhMapInfo *rhMapInfoLoadAllByChar(char *fileName, char chopper) 
 /* Load all rhMapInfo from a chopper separated file.
  * Dispose of this with rhMapInfoFreeList(). */
 {
 struct rhMapInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[10];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = rhMapInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct rhMapInfo *rhMapInfoCommaIn(char **pS, struct rhMapInfo *ret)
 /* Create a rhMapInfo out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new rhMapInfo */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->name = sqlStringComma(&s);
 ret->zfinId = sqlStringComma(&s);
 ret->linkageGp = sqlStringComma(&s);
 ret->position = sqlUnsignedComma(&s);
 ret->distance = sqlUnsignedComma(&s);
 ret->markerType = sqlStringComma(&s);
 ret->source = sqlStringComma(&s);
 ret->mapSite = sqlStringComma(&s);
 ret->leftPrimer = sqlStringComma(&s);
 ret->rightPrimer = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void rhMapInfoFree(struct rhMapInfo **pEl)
 /* Free a single dynamically allocated rhMapInfo such as created
  * with rhMapInfoLoad(). */
 {
 struct rhMapInfo *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->name);
 freeMem(el->zfinId);
 freeMem(el->linkageGp);
 freeMem(el->markerType);
 freeMem(el->source);
 freeMem(el->mapSite);
 freeMem(el->leftPrimer);
 freeMem(el->rightPrimer);
 freez(pEl);
 }
 
 void rhMapInfoFreeList(struct rhMapInfo **pList)
 /* Free a list of dynamically allocated rhMapInfo's */
 {
 struct rhMapInfo *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     rhMapInfoFree(&el);
     }
 *pList = NULL;
 }
 
 void rhMapInfoOutput(struct rhMapInfo *el, FILE *f, char sep, char lastSep) 
 /* Print out rhMapInfo.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->zfinId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->linkageGp);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->position);
 fputc(sep,f);
 fprintf(f, "%u", el->distance);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->markerType);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->source);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->mapSite);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->leftPrimer);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->rightPrimer);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */