e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/stsInfoMouseNew.c src/hg/lib/stsInfoMouseNew.c
index f129c93..5ee2f21 100644
--- src/hg/lib/stsInfoMouseNew.c
+++ src/hg/lib/stsInfoMouseNew.c
@@ -1,280 +1,283 @@
 /* stsInfoMouseNew.c was originally generated by the autoSql program, which also 
  * generated stsInfoMouseNew.h and stsInfoMouseNew.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "stsInfoMouseNew.h"
 
 
 void stsInfoMouseNewStaticLoad(char **row, struct stsInfoMouseNew *ret)
 /* Load a row from stsInfoMouseNew table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->identNo = sqlUnsigned(row[0]);
 ret->name = row[1];
 ret->MGIId = sqlUnsigned(row[2]);
 ret->MGIName = row[3];
 ret->UiStsId = sqlUnsigned(row[4]);
 ret->nameCount = sqlUnsigned(row[5]);
 ret->alias = row[6];
 ret->primer1 = row[7];
 ret->primer2 = row[8];
 ret->distance = row[9];
 ret->sequence = sqlUnsigned(row[10]);
 ret->organis = row[11];
 ret->wigName = row[12];
 ret->wigChr = row[13];
 ret->wigGeneticPos = atof(row[14]);
 ret->mgiName = row[15];
 ret->mgiChr = row[16];
 ret->mgiGeneticPos = atof(row[17]);
 ret->rhName = row[18];
 ret->rhChr = row[19];
 ret->rhGeneticPos = atof(row[20]);
 ret->RHLOD = atof(row[21]);
 ret->GeneName = row[22];
 ret->GeneID = row[23];
 ret->clone = row[24];
 }
 
 struct stsInfoMouseNew *stsInfoMouseNewLoad(char **row)
 /* Load a stsInfoMouseNew from row fetched with select * from stsInfoMouseNew
  * from database.  Dispose of this with stsInfoMouseNewFree(). */
 {
 struct stsInfoMouseNew *ret;
 
 AllocVar(ret);
 ret->identNo = sqlUnsigned(row[0]);
 ret->name = cloneString(row[1]);
 ret->MGIId = sqlUnsigned(row[2]);
 ret->MGIName = cloneString(row[3]);
 ret->UiStsId = sqlUnsigned(row[4]);
 ret->nameCount = sqlUnsigned(row[5]);
 ret->alias = cloneString(row[6]);
 ret->primer1 = cloneString(row[7]);
 ret->primer2 = cloneString(row[8]);
 ret->distance = cloneString(row[9]);
 ret->sequence = sqlUnsigned(row[10]);
 ret->organis = cloneString(row[11]);
 ret->wigName = cloneString(row[12]);
 ret->wigChr = cloneString(row[13]);
 ret->wigGeneticPos = atof(row[14]);
 ret->mgiName = cloneString(row[15]);
 ret->mgiChr = cloneString(row[16]);
 ret->mgiGeneticPos = atof(row[17]);
 ret->rhName = cloneString(row[18]);
 ret->rhChr = cloneString(row[19]);
 ret->rhGeneticPos = atof(row[20]);
 ret->RHLOD = atof(row[21]);
 ret->GeneName = cloneString(row[22]);
 ret->GeneID = cloneString(row[23]);
 ret->clone = cloneString(row[24]);
 return ret;
 }
 
 struct stsInfoMouseNew *stsInfoMouseNewLoadAll(char *fileName) 
 /* Load all stsInfoMouseNew from a whitespace-separated file.
  * Dispose of this with stsInfoMouseNewFreeList(). */
 {
 struct stsInfoMouseNew *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[25];
 
 while (lineFileRow(lf, row))
     {
     el = stsInfoMouseNewLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct stsInfoMouseNew *stsInfoMouseNewLoadAllByChar(char *fileName, char chopper) 
 /* Load all stsInfoMouseNew from a chopper separated file.
  * Dispose of this with stsInfoMouseNewFreeList(). */
 {
 struct stsInfoMouseNew *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[25];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = stsInfoMouseNewLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct stsInfoMouseNew *stsInfoMouseNewCommaIn(char **pS, struct stsInfoMouseNew *ret)
 /* Create a stsInfoMouseNew out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new stsInfoMouseNew */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->identNo = sqlUnsignedComma(&s);
 ret->name = sqlStringComma(&s);
 ret->MGIId = sqlUnsignedComma(&s);
 ret->MGIName = sqlStringComma(&s);
 ret->UiStsId = sqlUnsignedComma(&s);
 ret->nameCount = sqlUnsignedComma(&s);
 ret->alias = sqlStringComma(&s);
 ret->primer1 = sqlStringComma(&s);
 ret->primer2 = sqlStringComma(&s);
 ret->distance = sqlStringComma(&s);
 ret->sequence = sqlUnsignedComma(&s);
 ret->organis = sqlStringComma(&s);
 ret->wigName = sqlStringComma(&s);
 ret->wigChr = sqlStringComma(&s);
 ret->wigGeneticPos = sqlFloatComma(&s);
 ret->mgiName = sqlStringComma(&s);
 ret->mgiChr = sqlStringComma(&s);
 ret->mgiGeneticPos = sqlFloatComma(&s);
 ret->rhName = sqlStringComma(&s);
 ret->rhChr = sqlStringComma(&s);
 ret->rhGeneticPos = sqlFloatComma(&s);
 ret->RHLOD = sqlFloatComma(&s);
 ret->GeneName = sqlStringComma(&s);
 ret->GeneID = sqlStringComma(&s);
 ret->clone = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void stsInfoMouseNewFree(struct stsInfoMouseNew **pEl)
 /* Free a single dynamically allocated stsInfoMouseNew such as created
  * with stsInfoMouseNewLoad(). */
 {
 struct stsInfoMouseNew *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->name);
 freeMem(el->MGIName);
 freeMem(el->alias);
 freeMem(el->primer1);
 freeMem(el->primer2);
 freeMem(el->distance);
 freeMem(el->organis);
 freeMem(el->wigName);
 freeMem(el->wigChr);
 freeMem(el->mgiName);
 freeMem(el->mgiChr);
 freeMem(el->rhName);
 freeMem(el->rhChr);
 freeMem(el->GeneName);
 freeMem(el->GeneID);
 freeMem(el->clone);
 freez(pEl);
 }
 
 void stsInfoMouseNewFreeList(struct stsInfoMouseNew **pList)
 /* Free a list of dynamically allocated stsInfoMouseNew's */
 {
 struct stsInfoMouseNew *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     stsInfoMouseNewFree(&el);
     }
 *pList = NULL;
 }
 
 void stsInfoMouseNewOutput(struct stsInfoMouseNew *el, FILE *f, char sep, char lastSep) 
 /* Print out stsInfoMouseNew.  Separate fields with sep. Follow last field with lastSep. */
 {
 fprintf(f, "%u", el->identNo);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->MGIId);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->MGIName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->UiStsId);
 fputc(sep,f);
 fprintf(f, "%u", el->nameCount);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->alias);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->primer1);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->primer2);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->distance);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->sequence);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->organis);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->wigName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->wigChr);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->wigGeneticPos);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->mgiName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->mgiChr);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->mgiGeneticPos);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->rhName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->rhChr);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->rhGeneticPos);
 fputc(sep,f);
 fprintf(f, "%f", el->RHLOD);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->GeneName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->GeneID);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->clone);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */