e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/stsMapMouseNew.c src/hg/lib/stsMapMouseNew.c
index 0857b2a..3617456 100644
--- src/hg/lib/stsMapMouseNew.c
+++ src/hg/lib/stsMapMouseNew.c
@@ -1,203 +1,206 @@
 /* stsMapMouseNew.c was originally generated by the autoSql program, which also 
  * generated stsMapMouseNew.h and stsMapMouseNew.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "stsMapMouseNew.h"
 
 
 void stsMapMouseNewStaticLoad(char **row, struct stsMapMouseNew *ret)
 /* Load a row from stsMapMouseNew table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->chrom = row[0];
 ret->chromStart = sqlSigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = row[3];
 ret->score = sqlUnsigned(row[4]);
 ret->identNo = sqlUnsigned(row[5]);
 ret->ctgAcc = row[6];
 ret->otherAcc = row[7];
 ret->rhChrom = row[8];
 ret->rhPos = atof(row[9]);
 ret->rhLod = atof(row[10]);
 ret->wigChr = row[11];
 ret->wigPos = atof(row[12]);
 ret->mgiChrom = row[13];
 ret->mgiPos = atof(row[14]);
 }
 
 struct stsMapMouseNew *stsMapMouseNewLoad(char **row)
 /* Load a stsMapMouseNew from row fetched with select * from stsMapMouseNew
  * from database.  Dispose of this with stsMapMouseNewFree(). */
 {
 struct stsMapMouseNew *ret;
 
 AllocVar(ret);
 ret->chrom = cloneString(row[0]);
 ret->chromStart = sqlSigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = cloneString(row[3]);
 ret->score = sqlUnsigned(row[4]);
 ret->identNo = sqlUnsigned(row[5]);
 ret->ctgAcc = cloneString(row[6]);
 ret->otherAcc = cloneString(row[7]);
 ret->rhChrom = cloneString(row[8]);
 ret->rhPos = atof(row[9]);
 ret->rhLod = atof(row[10]);
 ret->wigChr = cloneString(row[11]);
 ret->wigPos = atof(row[12]);
 ret->mgiChrom = cloneString(row[13]);
 ret->mgiPos = atof(row[14]);
 return ret;
 }
 
 struct stsMapMouseNew *stsMapMouseNewLoadAll(char *fileName) 
 /* Load all stsMapMouseNew from a whitespace-separated file.
  * Dispose of this with stsMapMouseNewFreeList(). */
 {
 struct stsMapMouseNew *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[15];
 
 while (lineFileRow(lf, row))
     {
     el = stsMapMouseNewLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct stsMapMouseNew *stsMapMouseNewLoadAllByChar(char *fileName, char chopper) 
 /* Load all stsMapMouseNew from a chopper separated file.
  * Dispose of this with stsMapMouseNewFreeList(). */
 {
 struct stsMapMouseNew *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[15];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = stsMapMouseNewLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct stsMapMouseNew *stsMapMouseNewCommaIn(char **pS, struct stsMapMouseNew *ret)
 /* Create a stsMapMouseNew out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new stsMapMouseNew */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->chrom = sqlStringComma(&s);
 ret->chromStart = sqlSignedComma(&s);
 ret->chromEnd = sqlUnsignedComma(&s);
 ret->name = sqlStringComma(&s);
 ret->score = sqlUnsignedComma(&s);
 ret->identNo = sqlUnsignedComma(&s);
 ret->ctgAcc = sqlStringComma(&s);
 ret->otherAcc = sqlStringComma(&s);
 ret->rhChrom = sqlStringComma(&s);
 ret->rhPos = sqlFloatComma(&s);
 ret->rhLod = sqlFloatComma(&s);
 ret->wigChr = sqlStringComma(&s);
 ret->wigPos = sqlFloatComma(&s);
 ret->mgiChrom = sqlStringComma(&s);
 ret->mgiPos = sqlFloatComma(&s);
 *pS = s;
 return ret;
 }
 
 void stsMapMouseNewFree(struct stsMapMouseNew **pEl)
 /* Free a single dynamically allocated stsMapMouseNew such as created
  * with stsMapMouseNewLoad(). */
 {
 struct stsMapMouseNew *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->chrom);
 freeMem(el->name);
 freeMem(el->ctgAcc);
 freeMem(el->otherAcc);
 freeMem(el->rhChrom);
 freeMem(el->wigChr);
 freeMem(el->mgiChrom);
 freez(pEl);
 }
 
 void stsMapMouseNewFreeList(struct stsMapMouseNew **pList)
 /* Free a list of dynamically allocated stsMapMouseNew's */
 {
 struct stsMapMouseNew *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     stsMapMouseNewFree(&el);
     }
 *pList = NULL;
 }
 
 void stsMapMouseNewOutput(struct stsMapMouseNew *el, FILE *f, char sep, char lastSep) 
 /* Print out stsMapMouseNew.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->chrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%d", el->chromStart);
 fputc(sep,f);
 fprintf(f, "%u", el->chromEnd);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->score);
 fputc(sep,f);
 fprintf(f, "%u", el->identNo);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->ctgAcc);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->otherAcc);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->rhChrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->rhPos);
 fputc(sep,f);
 fprintf(f, "%f", el->rhLod);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->wigChr);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->wigPos);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->mgiChrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->mgiPos);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */