e70152e44cc66cc599ff6b699eb8adc07f3e656a kent Sat May 24 21:09:34 2014 -0700 Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment. diff --git src/hg/qa/countNib.c src/hg/qa/countNib.c index 5d0e054..d3597e5 100644 --- src/hg/qa/countNib.c +++ src/hg/qa/countNib.c @@ -1,40 +1,43 @@ /* countNib - count ACGT. */ + +/* Copyright (C) 2011 The Regents of the University of California + * See README in this or parent directory for licensing information. */ #include "common.h" #include "dnaseq.h" #include "nib.h" void countNib(char *nibFile) /* countNib - Count ACGT. */ { struct dnaSeq *seq; char *ptr; int i = 0; int a = 0; int c = 0; int g = 0; int t = 0; seq = nibLoadAll(nibFile); ptr = seq->dna; for (i=0; i<seq->size; i++) { if (ptr[i] == 'a') a++; else if (ptr[i] == 'c') c++; else if (ptr[i] == 'g') g++; else if (ptr[i] == 't') t++; } printf("a = %d\n", a); printf("c = %d\n", c); printf("g = %d\n", g); printf("t = %d\n", t); dnaSeqFree(&seq); } int main(int argc, char *argv[]) /* Process command line. */ { countNib(argv[1]); return 0; }