6a3091bb99ed140866169cf07a33dcbe6d7b0379
max
  Fri May 30 07:08:19 2014 -0700
changes after code review, refs #13332
diff --git src/hg/pslToBed/pslToBed.c src/hg/pslToBed/pslToBed.c
index 4fc7607..b389197 100644
--- src/hg/pslToBed/pslToBed.c
+++ src/hg/pslToBed/pslToBed.c
@@ -11,32 +11,32 @@
 
 void usage()
 /* print usage infomation and exit */
 {
 errAbort("pslToBed: tranform a psl format file to a bed format file.\n"
          "usage:\n"
          "    pslToBed psl bed\n"
 	 "options:\n"
 	 "    -cds=cdsFile\n"
 	 "cdsFile specifies a input cds tab-separated file which contains\n"
 	 "genbank-style CDS records showing cdsStart..cdsEnd\n"
 	 "e.g. NM_123456 34..305\n"
 	 "These coordinates are assumed to be in the query coordinate system\n"
 	 "of the psl, like those that are created from genePredToFakePsl\n"
 	 "    -posName\n"
-	 "write the full position in chrom:start-end format into the name field\n"
-	 "(can be used to create links to source position on details page)\n"
+	 "changes the qName field to qName:qStart-qEnd\n"
+	 "(can be used to create links to query position on details page)\n"
          );
 
 } 
 
 static struct optionSpec options[] = {
    {"cds", OPTION_STRING},
    {"posName", OPTION_BOOLEAN},
    {NULL, 0},
 };
 
 struct cds
 {
 int start, end;   // cds start and end 
 };