ab4fe8a17e861e446c64db7184742ff8db163791 mspeir Tue Jun 24 12:44:38 2014 -0700 Now Filter Verdict lines and related subsection will only be displayed on the canFam1 genomicSuperDups details page. Other species with a genomicSuperDups track essentially have no useful information in these lines (just things like NA, etc.), and these extra lines clutter up the aleady busy display, refs #13171 diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c index 8a0b52b..17f98ec 100644 --- src/hg/hgc/hgc.c +++ src/hg/hgc/hgc.c @@ -18979,36 +18979,39 @@ genomicSuperDupsStaticLoad(row+rowOffset, &dup); bedPrintPos((struct bed *)(&dup), 4, tdb); printf("Other Position: " "" "%s:%d-%d    \n", hgTracksPathAndSettings(), database, dup.otherChrom, dup.otherStart+1, dup.otherEnd, dup.otherChrom, dup.otherStart+1, dup.otherEnd); printf("" "View DNA for other position
\n", hgcPathAndSettings(), dup.otherStart, dup.otherEnd, "", dup.otherChrom, dup.otherStart, dup.otherEnd, dup.strand, database, tdb->track); printf("Other Position Relative Orientation:%s
\n", dup.strand); + if(sameString("canFam1", database)) + { printf("Filter Verdict: %s
\n", dup.verdict); printf("    testResult:%s
\n", dup.testResult); printf("    chits:%s
\n", dup.chits); printf("    ccov:%s
\n", dup.ccov); printf("    posBasesHit:%d
\n", dup.posBasesHit); + } else {}; if (alignUrl != NULL) printf("Optimal Global Alignment
\n", alignUrl, dup.alignfile, dup.chrom, dup.chromStart, dup.chromEnd); printf("Alignment Length: %d
\n", dup.alignL); printf("   Indels #: %d
\n", dup.indelN); printf("   Indels bp: %d
\n", dup.indelS); printf("   Aligned Bases: %d
\n", dup.alignB); printf("      Matching bases: %d
\n", dup.matchB); printf("      Mismatched bases: %d
\n", dup.mismatchB); printf("         Transitions: %d
\n", dup.transitionsB);