Commits for kent

v303_preview2 to v303_base (2014-07-14 to 2014-07-21) v303

• Making Improbizer take more sequences, and warn when you exceed limit.
  • src/ameme/ameme.c - lines changed 5, context: html, text, full: html, text
• Expanding limit on alignment size since machines are bigger now.
  • src/lib/axtAffine.c - lines changed 1, context: html, text, full: html, text
• Removing udcTimeout from cart since it can cause permanent delays if there.
  • src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
• Improving commenting a little.
  • src/hg/txCds/txCdsPredict/txCdsPredict.c - lines changed 2, context: html, text, full: html, text
• Adding cacheTime command line option.
  • src/hg/utils/hubCheck/hubCheck.c - lines changed 7, context: html, text, full: html, text
• Making missing ChIP control skip file rather than abort program.
  • src/hg/encode3/eap/eapSchedule/eapSchedule.c - lines changed 17, context: html, text, full: html, text
• Removing dm6 as contamination target since dm3 is good enough for this purpose.
  • src/hg/encode3/encodeDataWarehouse/lib/resetEdw - lines changed 1, context: html, text, full: html, text
• Fixing typo in comment.
  • src/hg/encode3/encodeDataWarehouse/inc/edwLib.h - lines changed 1, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 1, context: html, text, full: html, text