Commits for ceisenhart

v303_preview to v303_preview2 (2014-07-07 to 2014-07-14) v303

• A program that runs on SQL data. Re organizes the data into tissue specific rows for differential expression analysis
  • src/hg/expData/expData.c - lines changed 104, context: html, text, full: html, text
• Modified significantly. Takes in a processed table of expression data, and outputs a file with comparison data
  • src/hg/expData/expData.c - lines changed 117, context: html, text, full: html, text
• Changed comments to be more informative
  • src/utils/bamSplitByChrom/bamSplitByChrom.c - lines changed 1, context: html, text, full: html, text
• Updated the main for loop to be 0 based index rather than 1 based index
  • src/utils/bamMerge/bamMerge.c - lines changed 3, context: html, text, full: html, text
• Takes in input files and performs an expression analysis using a Hac Tree. The output file is a binary tree, each leaf node is a specific tissue.
  • src/hg/expData/expData.c - lines changed 190, context: html, text, full: html, text
• The program now prints out files in Json format
  • src/hg/expData/expData.c - lines changed 93, context: html, text, full: html, text
• build update from 3.01 to 3.02Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent
  
• Added new comments, json output is still not working
  • src/hg/expData/expData.c - lines changed 45, context: html, text, full: html, text