36a144abd48a48b302455c2042b459b375f95b43
hiram
  Wed Jul 23 15:10:42 2014 -0700
display alignStart 1-relative for users refs #9741
diff --git src/hg/hgc/joinedRmskClick.c src/hg/hgc/joinedRmskClick.c
index aa586fc..42a0d31 100644
--- src/hg/hgc/joinedRmskClick.c
+++ src/hg/hgc/joinedRmskClick.c
@@ -262,31 +262,31 @@
 		*poundPtr = '\0';
 		char *slashPtr = index (class, '/');
 		if (slashPtr)
 		    {
 		    // Terminate class string properly
 		    safecpy (family, sizeof (family), slashPtr + 1);
 		    *slashPtr = '\0';
 		    }
 		}
 
 	    printf ("<b>Repeat:</b> %s<br>\n", rmJoin->name);
 	    printf ("<b>Class:</b> %s<br>\n", class);
 	    printf ("<b>Family:</b> %s<br>\n", family);
 	    printf ("<b>Orientation:</b> %s<br>\n", rmJoin->strand);
 	    printf ("<b>Joined Element Genomic Range:</b> %s:%d-%d<br>\n",
-		    rmJoin->chrom, rmJoin->alignStart, rmJoin->alignEnd);
+		    rmJoin->chrom, rmJoin->alignStart+1, rmJoin->alignEnd);
 	    printf ("<br><br>\n");
 	    }
 	sqlFreeResult (&sr2);
 	}
 
     /*
      * Locate *.out annotation for this element
      */
     if (hTableExists (database, outTable))
 	{
 	int isFirst = 0;
 	struct rmskOut2 *ro;
 	hFindSplitTable (database, seqName, outTable, qTable, &hasBin);
 	sqlSafef (query, sizeof (query),
 	       "select * from %s where genoName = '%s' and genoStart >= %d"