965d1048e8671fb3a5630fe75deb88f24df386d7 kate Wed Aug 13 15:01:59 2014 -0700 Expand schema for GTex. Create tissue short names and use these in sample and data tables. refs #13504 diff --git src/hg/lib/gtexTissueData.sql src/hg/lib/gtexTissueData.sql new file mode 100644 index 0000000..47b69af --- /dev/null +++ src/hg/lib/gtexTissueData.sql @@ -0,0 +1,13 @@ +# gtexTissueData.sql was originally generated by the autoSql program, which also +# generated gtexTissueData.c and gtexTissueData.h. This creates the database representation of +# an object which can be loaded and saved from RAM in a fairly +# automatic way. + +#GTEX Expression median level by tissue (RPKM levels, unmapped) +CREATE TABLE gtexTissueData ( + geneId varchar(255) not null, # Gene identifier (ensembl) + tissueCount int unsigned not null, # Number of tissues + scores longblob not null, # RPKM median expression levels + #Indices + PRIMARY KEY(geneId) +);