bf524d6531aaf63908cca92a4c4868062b276cfa
angie
  Mon Aug 18 11:50:35 2014 -0700
Revert "Restoring the default values for lfColors after the changes in a4adfa326b and 936b5b531."
This reverts commit 706b20f0ff54a3bf502e9697c35f46a267c1aec9.

refs #13833

diff --git src/hg/hgTracks/simpleTracks.c src/hg/hgTracks/simpleTracks.c
index 391980c..48ae3da 100644
--- src/hg/hgTracks/simpleTracks.c
+++ src/hg/hgTracks/simpleTracks.c
@@ -2414,32 +2414,32 @@
 		hvGfxFindColorIx(hvg, itemRgb.r, itemRgb.g, itemRgb.b);
 	}
     else
 	*retColor = *retBarbColor = lf->filterColor;
     }
 else if (tg->itemColor)
     {
     *retColor = tg->itemColor(tg, lf, hvg);
     *retBarbColor = tg->ixAltColor;
     }
 else
     {
     boolean isXeno = (tg->subType == lfSubXeno)
                                 || (tg->subType == lfSubChain)
                                 || startsWith("mrnaBla", tg->table);
-    *retColor     = colorBySpectrumOrDefault(hvg,tg,lf->grayIx+isXeno, tg->ixColor);
-    *retBarbColor = colorBySpectrumOrDefault(hvg,tg,lf->grayIx,        tg->ixAltColor);
+    *retColor     = colorBySpectrumOrDefault(hvg,tg,lf->grayIx+isXeno,*retColor);
+    *retBarbColor = colorBySpectrumOrDefault(hvg,tg,lf->grayIx,       *retBarbColor);
     }
 }
 
 Color linkedFeaturesNameColor(struct track *tg, void *item, struct hvGfx *hvg)
 /* Determine the color of the name for the linked feature. */
 {
 Color col, barbCol;
 lfColors(tg, item, hvg, &col, &barbCol);
 return col;
 }
 
 struct simpleFeature *simpleFeatureCloneList(struct simpleFeature *list)
 /* Just copies the simpleFeature list. This is good for making a copy */
 /* when the codon list is made. */
 {