bba33ab402f25587ca2820b7adf89835faba6e21
braney
  Wed Aug 20 12:27:04 2014 -0700
add bigGenePred.as for genePred support in track hubs
diff --git src/hg/lib/bigGenePred.as src/hg/lib/bigGenePred.as
new file mode 100644
index 0000000..aa9e52c
--- /dev/null
+++ src/hg/lib/bigGenePred.as
@@ -0,0 +1,25 @@
+table bigGenePred
+"bigGenePred gene models"
+   (
+   string chrom;       "Reference sequence chromosome or scaffold"
+   uint   chromStart;  "Start position in chromosome"
+   uint   chromEnd;    "End position in chromosome"
+   string name;        "Name or ID of item, ideally both human readable and unique"
+   uint score;         "Score (0-1000)"
+   char[1] strand;     "+ or - for strand"
+   uint thickStart;    "Start of where display should be thick (start codon)"
+   uint thickEnd;      "End of where display should be thick (stop codon)"
+   uint itemRgb;       "RGB value encoded into hex: 00RRGGBB"
+   int blockCount;     "Number of blocks"
+   int[blockCount] blockSizes; "Comma separated list of block sizes"
+   int[blockCount] chromStarts; "Start positions relative to chromStart"
+   string name2;       "Alternative/human readable name"
+   string cdsStartStat; "enum('none','unk','incmpl','cmpl')"
+   string cdsEndStat;   "enum('none','unk','incmpl','cmpl')"
+   int[blockCount] exonFrames; "Exon frame {0,1,2}, or -1 if no frame for exon"
+   string type;        "Transcript type"
+   string geneName;    "Primary identifier for gene"
+   string geneName2;   "Alternative/human readable gene name"
+   string geneType;    "Gene type"
+   )
+