f1f3b0c665888b7b55c3b4bcc9dfbc327be5ceef
brianlee
  Thu Sep 11 15:02:38 2014 -0700
Changes to news to remove www.genome.ucsc.edu to genome.ucsc.edu
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                  <font size="4"><a name="TOC"></a><b>&nbsp; News</b></font><a href="http://www.twitter.com/GenomeBrowser" target="_blank"><img src="http://twitter-badges.s3.amazonaws.com/t_small-a.png" title="Follow &#64;GenomeBrowser on Twitter" alt="Follow &#64;GenomeBrowser on Twitter" style="vertical-align:text-bottom; margin-left: 15px;"></a>
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           <P>
           To receive announcements of new genome 
           assembly releases, new software features, updates and 
           training seminars by email, subscribe to the
           <A HREF="http://groups.google.com/a/soe.ucsc.edu/group/genome-announce?hl=en"
           TARGET=_blank>genome-announce</A> mailing list.</P>
 
     <!-- start news -->
         <hr>
         <font face="courier" size="3"><b>04 September 2014 -
         New ENCODE portal launched at <a href="https://www.encodeproject.org">www.encodeproject.org</a></b>
         </font>
         <p>
         The website for up-to-date information about the ENCODE project is no
-        longer hosted at <a href="ENCODE/index.html">www.genome.ucsc.edu/ENCODE</a>.
+        longer hosted at <a href="ENCODE/index.html">genome.ucsc.edu/ENCODE</a>.
         Those UCSC ENCODE pages now archive information and tools from the ENCODE
         production and pilot phases (2003 to 2012) including live links to visualize and download data.
         Please navigate to the new ENCODE portal for recent data releases. Along with the ability to use
         faceted searching to explore all ENCODE data, the ENCODE portal provides visualization
         in the UCSC Genome Browser via a "Visualize Data" link on assay pages when
         processed data files are available.
         </p>
 
 	<hr>
 	<font face="courier" size="3"><b>03 September 2014 -
 	Data from the FaceBase Consortium Now Available in the Genome Browser</b>
 	</font>
 	</p>
 	<p>
 	We are pleased to announce that much of the data from the <a href="https://www.facebase.org/"
 	target"_blank">FaceBase Consortium</a> is now available in the UCSC Genome Browser as a
 	public track hub. This track hub contains data from numerous experiments carried out by
 	the Potter and Visel labs to study craniofacial development in mice and humans, with
 	tracks for the mm9, mm10, hg18, and hg19 assemblies. You can check out the hub on the
 	mm9 assembly
 	<a href="/cgi-bin/hgTracks?db=mm9&position=chr12%3A57795963-57815592&hubUrl=http://trackhub.facebase.org/hub.txt"
 	target="_blank">here</a>. In addition to this public track hub, we have a set of
 	microarray expression data hosted as a native track for both the mm9 and mm10 assemblies.
 	This expression data compares expression across the mouse genome for a number of embryonic
 	days and craniofacial cell types. For more information on this track, please see the track
 	<a href="/cgi-bin/hgTrackUi?org=mouse&db=mm9&g=FaceBase24SampleTypesAvg"
 	target="_blank">description page</a>.
 	</p>
 	<p>
 	We would like to thank Robert Kuhn, Pauline Fujita, and Matthew Speir from UCSC and Thomas
 	Maher from the FaceBase Consortium for their efforts in bringing these resources to the
 	UCSC Genome Browser.
 	</p>
         <hr>
 
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         <p>
         <font face="courier" size="3"><b>04 September 2014 -
         New ENCODE portal launched at
         <a href="https://www.encodeproject.org">www.encodeproject.org</a></b>: </font>
         The website for up-to-date information about the ENCODE project is no
-        longer hosted at <a href="ENCODE/index.html">www.genome.ucsc.edu/ENCODE</a>.
+        longer hosted at <a href="ENCODE/index.html">genome.ucsc.edu/ENCODE</a>.
         <a href="goldenPath/newsarch.html#090414">Read more</a>.
         </p>
 
 	<p>
 	<font face="courier" size="3"><b>03 September 2014 -
 	Data from the FaceBase Consortium Now Available in the Genome Browser</b>: </font>
 	We are pleased to announce that much of the data from the <a href="https://www.facebase.org/"
 	target"_blank">FaceBase Consortium</a> is now available in the UCSC Genome Browser as a public track hub.
         <a href="goldenPath/newsarch.html#090314">Read more</a>.
 	</p>
         <!-- start archives -->
 	<p>
 	<font face="courier" size="3"><b>30 July 2014 -
         New Rat (rn6) Assembly Now Available in the Genome Browser</b>:</font>
         We are excited to announce the release of a Genome Browser for the July 2014 assembly
         of rat, <em>Rattus norvegicus</em> (RGSC Rnor_6.0, UCSC version rn6).
         <a href="goldenPath/newsarch.html#073014">Read more</a>.
 	</p>
 
         <p>
         <font face="courier" size="3"><b> 15 July 2014 -
         New Shrew (sorAra2) Assembly Now Available in the Genome Browser</b>: </font>
         We are pleased to announce the release of a Genome Browser for the August 2008
         assembly of shrew, <em>Sorex araneus</em> (Broad SorAra2.0, UCSC version
         sorAra2). <a href="goldenPath/newsarch.html#071514">Read more</a>.
         </p>
 
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