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To receive announcements of new genome assembly releases, new software features, updates and training seminars by email, subscribe to the genome-announce mailing list. + 30 September 2014 - + Genome Browser for the Ebola Virus Now Available + + + We are excited to announce the release of a Genome Browser for the June 2014 assembly + of Ebola Virus (Sierra Leone 2014 (G3683/KM034562.1), UCSC version eboVir3)! The sequence, + KM034562 was + deposited into GenBank by the Pardis Sabeti lab at the Broad Intstitue. We have worked + closely with the Sabeti lab and other Ebola experts throughout the world to incorporate + annotations that will be useful to those studying Ebola. Annotation tracks included in this + intitial release include genes from NCBI, B- and T-cell epitopes from the IEDB, structural annotiation from UniProt and a wealth of SNP data from the + 2014 publication + from the Sabeti lab. This initial release also contains a 160-way alignment of + 158 Ebola virus sequences from various African outbreaks, and 2 Marburg virus sequences. + You can find links to the Ebola virus Genome Browser and more information on the Ebola virus + itself on our Ebola Portal. + ++ Bulk downloads of the sequence and annotation data are available via the Genome + Browser + FTP server + or the + Downloads + page. These data have + specific conditions for use. + The Ebola virus (eboVir3) browser annotation tracks were generated by UCSC and + collaborators worldwide. See the + Credits page for a detailed + list of the organizations and individuals who contributed to this release. + + +23 September 2014 - Ensembl Regulatory Build Now Available in the Genome Browser We are pleased to announce that data from the Ensembl Regulatory Build is now available in the UCSC Genome Browser as a public track hub for both hg19 and hg38. This track hub contains promoters and their flanking regions, enhancers, and many other regulatory features predicted across a number of cell lines using annotated segmentation states. Click here to view this hub on the hg19 assembly, or click here to view it on the hg38 assembly. We would like to thank our collaborators Daniel Zerbino, Steve Wilder, and Nathan Johnson from Ensembl and Kate Rosenbloom and Matthew Speir from UCSC for their efforts in bringing these resources to the UCSC Genome Browser. -- 04 September 2014 - - New ENCODE portal launched at www.encodeproject.org - + + + + 04 September 2014 - New ENCODE portal launched at www.encodeproject.org: The website for up-to-date information about the ENCODE project is no longer hosted at genome.ucsc.edu/ENCODE. Read more. - --> - -03 September 2014 - Data from the FaceBase Consortium Now Available in the Genome Browser: We are pleased to announce that much of the data from the FaceBase Consortium is now available in the UCSC Genome Browser as a public track hub. Read more. -- 30 July 2014 - - New Rat (rn6) Assembly Now Available in the Genome Browser: - We are excited to announce the release of a Genome Browser for the July 2014 assembly - of rat, Rattus norvegicus (RGSC Rnor_6.0, UCSC version rn6). - Read more. - - |