Commits for hiram

v308_preview2 to v308_base (2014-10-27 to 2014-11-03) v308

• running up lastz to equCab2 refs #14221
  • src/hg/makeDb/doc/bosTau8.txt - lines changed 118, context: html, text, full: html, text
• fixup mostConserved construction refs #14254
  • src/hg/makeDb/doc/eboVir3/phastCons160way.txt - lines changed 9, context: html, text, full: html, text
• readjust default viz phastCons phyloP refs #14254
  • src/hg/makeDb/trackDb/ebola/eboVir3/trackDb.160way.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ebola/eboVir3/trackDb.strainName160way.ra - lines changed 2, context: html, text, full: html, text
• finished equCab2 lastz refs #14221
  • src/hg/makeDb/doc/bosTau8.txt - lines changed 26, context: html, text, full: html, text
• joinedRmsk composite only on alpha, single track on beta public refs #9741
  • src/hg/makeDb/trackDb/joinedRmsk.ra - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/joinedRmskComposite.ra - lines changed 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 21, context: html, text, full: html, text
• shorter short label refs #9741
  • src/hg/makeDb/trackDb/joinedRmsk.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/joinedRmskComposite.ra - lines changed 1, context: html, text, full: html, text
• finished equCab2 lastz refs #14221
  • src/hg/makeDb/doc/bosTau6.txt - lines changed 72, context: html, text, full: html, text
• ignore muPIT and check all dbs for rmskJoined refs #14267 #9741
  • src/hg/makeDb/schema/all.joiner - lines changed 9, context: html, text, full: html, text
• completed muPIT track refs #14267
  • src/hg/makeDb/doc/eboVir3/muPIT.txt - lines changed 27, context: html, text, full: html, text
  • src/hg/makeDb/doc/eboVir3/threeBaseAATrack.pl - lines changed 65, context: html, text, full: html, text
• v308 final build refs #14194
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 3, context: html, text, full: html, text
• New version number v308
  • src/hg/inc/versionInfo.h - lines changed 1, context: html, text, full: html, text