f2f6c0df7b846635f052b0eeae8ed49317e4313d
ann
Wed Oct 22 09:45:37 2014 -0700
adding links to the store!
diff --git src/hg/hgLiftOver/hgLiftOver.c src/hg/hgLiftOver/hgLiftOver.c
index 9678b86..a67789c 100644
--- src/hg/hgLiftOver/hgLiftOver.c
+++ src/hg/hgLiftOver/hgLiftOver.c
@@ -299,31 +299,31 @@
cgiSimpleTableRowStart();
cgiTableField("If thickStart/thickEnd is not mapped, use the closest mapped base:");
cgiSimpleTableFieldStart();
printf("%s", fudgeThick ? "on" : "off");
cgiTableFieldEnd();
cgiTableRowEnd();
cgiTableEnd();
}
void webDownloads()
{
webNewSection("Command Line Tool");
cgiParagraph(
"To lift genome annotations locally on Linux systems, download the "
-""
+""
"liftOver executable and the appropriate "
""
"chain file."
" Run liftOver with no arguments to see the usage message.\n");
}
double scoreLiftOverChain(struct liftOverChain *chain,
char *fromOrg, char *fromDb, char *toOrg, char *toDb,
char *cartOrg, char *cartDb, struct hash *dbRank,
struct hash *dbHash)
/* Score the chain in terms of best match for cart settings */
{
double score = 0;
struct dbDb *chainFromDbDb = hashFindVal(dbHash, chain->fromDb);