2c4c813bcb91cf575584d868a1d145f3a3bc6416 kate Mon Nov 17 00:28:14 2014 -0800 Add peptide table with sequence and other info for details page. refs #25054 diff --git src/hg/lib/peptideAtlasPeptide.sql src/hg/lib/peptideAtlasPeptide.sql new file mode 100644 index 0000000..ef50e9d --- /dev/null +++ src/hg/lib/peptideAtlasPeptide.sql @@ -0,0 +1,15 @@ +# peptideAtlasPeptide.sql was originally generated by the autoSql program, which also +# generated peptideAtlasPeptide.c and peptideAtlasPeptide.h. This creates the database representation of +# an object which can be loaded and saved from RAM in a fairly +# automatic way. + +#PeptideAtlas peptide description +CREATE TABLE peptideAtlasPeptide ( + accession varchar(255) not null, # Accession + sequence varchar(255) not null, # Amino acid sequence + sampleCount int not null, # Number of samples where this peptide was observed + hydrophobicity float not null, # Hydrophobicity metric + proteotypicScore float not null, # Metric of suitability of this peptide for protein identification + #Indices + PRIMARY KEY(accession) +);