413eea60a2ca4d9c534a6750fcbf332ffa7e1e36
max
  Thu Nov 27 03:06:00 2014 -0800
moving bigbed files to a location that is less lame, refs #14427
diff --git src/beacon/makefile src/beacon/makefile
index f7e1171..7881578 100644
--- src/beacon/makefile
+++ src/beacon/makefile
@@ -1,56 +1,53 @@
 include ../inc/common.mk
 
 #cannot use common include rules, don't know how to overwrite :: targets
 #include ../../inc/cgi_build_rules.mk
 
 ifeq (${CGI_BIN_USER},)
     CGI_BIN_USER=${CGI_BIN}-${USER}
 endif
 
 ifeq (${CGI_BIN_BETA},)
     CGI_BIN_BETA=${CGI_BIN}-beta
 endif
 
 my::
 	pylint -E query
 	mkdir -p ${CGI_BIN_USER}/beacon
 	rm -f ${CGI_BIN_USER}/beacon/query
 	cp -p query ${CGI_BIN_USER}/beacon/
 	cp -p accCounts.gdbm ${CGI_BIN_USER}/beacon/
 	chmod a+w ${CGI_BIN_USER}/beacon/accCounts.gdbm
 	cp -p insdcToUcsc.tab ${CGI_BIN_USER}/beacon/
 	cp ${BINDIR}/bigBedToBed ${CGI_BIN_USER}/beacon/
-	cp /hive/data/genomes/hg19/bed/beacon/*.bb ${CGI_BIN_USER}/beacon/
 	cd ${CGI_BIN_USER}/beacon/ && ln -sf query queryHgmd && ln -sf query queryClinvar && ln -sf query queryLovd && ln -sf query queryUniprot
 
 
 alpha::
 	pylint -E query
 	mkdir -p ${CGI_BIN}/beacon
 	rm -f ${CGI_BIN}/beacon/query
 	cp -p query ${CGI_BIN}/beacon/
 	cp -p accCounts.gdbm ${CGI_BIN}/beacon/
 	chmod a+w ${CGI_BIN}/beacon/accCounts.gdbm
 	cp -p insdcToUcsc.tab ${CGI_BIN}/beacon/
 	cp ${BINDIR}/bigBedToBed ${CGI_BIN}/beacon/
-	cp /hive/data/genomes/hg19/bed/beacon/*.bb ${CGI_BIN}/beacon/
 	cd ${CGI_BIN}/beacon/ && ln -sf query queryHgmd && ln -sf query queryClinvar && ln -sf query queryLovd && ln -sf query queryUniprot
 
 beta::
 	pylint -E query
 	mkdir -p ${CGI_BIN_BETA}/beacon
 	rm -f ${CGI_BIN_BETA}/beacon/query
 	cp -p query ${CGI_BIN_BETA}/beacon/
 	cp -p accCounts.gdbm ${CGI_BIN_BETA}/beacon/
 	chmod a+w ${CGI_BIN_BETA}/beacon/accCounts.gdbm
 	cp -p insdcToUcsc.tab ${CGI_BIN_BETA}/beacon/
 	# for beta, using the stable binary from /cluster/bin
 	cp /cluster/bin/x86_64/bigBedToBed ${CGI_BIN_BETA}/beacon/
-	cp /hive/data/genomes/hg19/bed/beacon/*.bb ${CGI_BIN}/beacon/
 	cd ${CGI_BIN_BETA}/beacon/ && ln -sf query queryHgmd && ln -sf query queryClinvar && ln -sf query queryLovd && ln -sf query queryUniprot
 
 clean::
 	rm -f 
 
 compile::