File Changes for kent

v310_preview to v310_preview2 (2014-12-08 to 2014-12-15) v310

• src/blat/version.doc
  • lines changed 1, context: html, text, full: html, text
    Bumped version number.
• src/hg/cirm/cdw/cdwAddAssembly/cdwAddAssembly.c
  • lines changed 89, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
  • lines changed 1, context: html, text, full: html, text
    Getting to compile again after moving a .h file.
• src/hg/cirm/cdw/cdwAddAssembly/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwAddQaContamTarget/cdwAddQaContamTarget.c
  • lines changed 55, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwAddQaContamTarget/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwAddQaEnrichTarget/cdwAddQaEnrichTarget.c
  • lines changed 91, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
  • lines changed 1, context: html, text, full: html, text
    Getting to compile again after moving a .h file.
• src/hg/cirm/cdw/cdwAddQaEnrichTarget/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwAddSubscriber/cdwAddSubscriber.c
  • lines changed 93, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwAddSubscriber/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwChangeFormat/cdwChangeFormat.c
  • lines changed 83, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwChangeFormat/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwCorrectFileTags/cdwCorrectFileTags.c
  • lines changed 143, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwCorrectFileTags/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwCreateUser/cdwCreateUser.c
  • lines changed 44, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwCreateUser/makefile
  • lines changed 19, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwFakeManifestFromSubmit/cdwFakeManifestFromSubmit.c
  • lines changed 132, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwFakeManifestFromSubmit/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwJob/cdwJob.c
  • lines changed 159, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwJob/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeContaminationQa/cdwMakeContaminationQa.c
  • lines changed 198, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeContaminationQa/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c
  • lines changed 541, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeEnrichments/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakePairedEndQa/cdwMakePairedEndQa.c
  • lines changed 306, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakePairedEndQa/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeRepeatQa/cdwMakeRepeatQa.c
  • lines changed 127, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeRepeatQa/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeReplicateQa/cdwMakeReplicateQa.c
  • lines changed 525, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeReplicateQa/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeValidFile/cdwMakeValidFile.c
  • lines changed 730, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
  • lines changed 1, context: html, text, full: html, text
    Getting to compile again after moving a .h file.
• src/hg/cirm/cdw/cdwMakeValidFile/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeWigSpotQa/cdwMakeWigSpotQa.c
  • lines changed 124, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwMakeWigSpotQa/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwQaEvaluate/cdwQaEvaluate.c
  • lines changed 577, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwQaEvaluate/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwReallyRemoveFiles/cdwReallyRemoveFiles.c
  • lines changed 142, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwReallyRemoveFiles/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwRetryJob/cdwRetryJob.c
  • lines changed 100, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwRetryJob/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwRunDaemon/cdwRunDaemon.c
  • lines changed 336, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwRunDaemon/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwRunOnIds/cdwRunOnIds.c
  • lines changed 62, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwRunOnIds/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
  • lines changed 1171, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwSubmit/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwUndeprecate/cdwUndeprecate.c
  • lines changed 57, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwUndeprecate/makefile
  • lines changed 4, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebAuthLogin/cdwWebAuthLogin.c
  • lines changed 110, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebAuthLogin/makefile
  • lines changed 16, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebAuthLogout/cdwWebAuthLogout.c
  • lines changed 18, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebAuthLogout/makefile
  • lines changed 16, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebBrowse/cdwWebBrowse.c
  • lines changed 486, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebBrowse/makefile
  • lines changed 16, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebCreateUser/cdwWebCreateUser.c
  • lines changed 72, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebCreateUser/makefile
  • lines changed 16, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebDeprecate/cdwWebDeprecate.c
  • lines changed 209, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebDeprecate/makefile
  • lines changed 16, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebSubmit/cdwWebSubmit.c
  • lines changed 352, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/cdwWebSubmit/makefile
  • lines changed 16, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/inc/cdw.h
  • lines changed 2013, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/inc/cdwBamFileFromRa.h
  • lines changed 18, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/inc/cdwFastqFileFromRa.h
  • lines changed 18, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/inc/cdwLib.h
  • lines changed 369, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/inc/cdwQaWigSpotFromRa.h
  • lines changed 21, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/inc/cdwValid.h
  • lines changed 42, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdw.as
  • lines changed 387, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdw.c
  • lines changed 5145, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdw.sql
  • lines changed 458, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdwBamFileFromRa.c
  • lines changed 210, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdwFastqFileFromRa.c
  • lines changed 309, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdwLib.c
  • lines changed 1693, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdwQaWigSpotFromRa.c
  • lines changed 139, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/cdwValid.c
  • lines changed 162, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/lib/makefile
  • lines changed 11, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/cdw/makefile
  • lines changed 75, context: html, text, full: html, text
    Initial import of encodeDataWarehouse code base to make CIRM data warehouse. Mostly this is just automatic string substitutions of 'cdw' for 'edw', 'CIRM' for 'ENCODE', and so forth. Also got rid of a lot of programs that won't be relevant.
• src/hg/cirm/quakeLab/djangoModelToAs/djangoModelToAs.c
  • lines changed 4, context: html, text, full: html, text
    Adding auto-id, and handling text fields.
• src/hg/makeDb/doc/encode3/hg38_encode2_dnase1.txt
  • lines changed 8, context: html, text, full: html, text
    Improved comments
• src/inc/genoFind.h
  • lines changed 1, context: html, text, full: html, text
    Bumping version