Commits for hartera

v311_preview2 to v311_base (2015-01-20 to 2015-01-26) v311

• Added track and searches for Retroposed Genes V6.
  • src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra - lines changed 53, context: html, text, full: html, text
• Added track for and searches for Retroposed Genes V9.
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 53, context: html, text, full: html, text
• Documented building the Retroposed Genes V6 track.
  • src/hg/makeDb/doc/mm10.txt - lines changed 133, context: html, text, full: html, text
• Corrected typos in Retroposed Genes V6 documentation.
  • src/hg/makeDb/doc/mm10.txt - lines changed 2, context: html, text, full: html, text
• added dataVersion line for ucscRetroAli6.
  • src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra - lines changed 1, context: html, text, full: html, text
• added dataVersion line for ucscRetroAli6.
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 1, context: html, text, full: html, text
• added more information to the Retroposed Genes V6 track.
  • src/hg/makeDb/doc/mm10.txt - lines changed 2, context: html, text, full: html, text
• Documented building the Retroposed Genes V9 track.
  • src/hg/makeDb/doc/hg38/hg38.txt - lines changed 127, context: html, text, full: html, text
• Description for Retroposed Genes V6 track.
  • src/hg/makeDb/trackDb/mouse/mm10/ucscRetroAli6.html - lines changed 146, context: html, text, full: html, text
• Description for Retroposed Genes V9 track.
  • src/hg/makeDb/trackDb/human/hg38/ucscRetroAli9.html - lines changed 146, context: html, text, full: html, text
• Edited track description.
  • src/hg/makeDb/trackDb/human/hg38/ucscRetroAli9.html - lines changed 1, context: html, text, full: html, text
• Edited track description.
  • src/hg/makeDb/trackDb/mouse/mm10/ucscRetroAli6.html - lines changed 1, context: html, text, full: html, text
• Added tag so that link from Break in Orthology table will jump to the text in this description describing that feature.
  • src/hg/makeDb/trackDb/mouse/mm10/ucscRetroAli6.html - lines changed 1, context: html, text, full: html, text
• Added tag so that link from Break in Orthology table will jump to the text in this description describing that feature.
  • src/hg/makeDb/trackDb/human/hg38/ucscRetroAli9.html - lines changed 1, context: html, text, full: html, text
• Changed table heading to match corresponding description section for table. Changed column heading to Score as it is not a percentage, score is from 0-130.
  • src/hg/hgc/retroClick.c - lines changed 2, context: html, text, full: html, text
• Added Retroposed Genes V6 for mm10 (ucscRetro*6) and Retroposed Genes V9 for hg38 (ucscRetro*9).
  • src/hg/makeDb/schema/all.joiner - lines changed 21, context: html, text, full: html, text
• Updated description as per Robert Baertsch's suggestions.
  • src/hg/makeDb/trackDb/mouse/mm10/ucscRetroAli6.html - lines changed 13, context: html, text, full: html, text
• Updated description as per Robert Baertsch's suggestions. Corrected reference to assembly.
  • src/hg/makeDb/trackDb/human/hg38/ucscRetroAli9.html - lines changed 14, context: html, text, full: html, text
• Remove extra comments. Changed printf statements to verbose.
  • src/hg/pslCDnaGenomeMatch/pslCDnaGenomeMatch.c - lines changed 87, context: html, text, full: html, text