8b49d2145ae719c3b3577de7956f7b9131c385ba
angie
  Wed Jan 7 09:43:45 2015 -0800
Libified code from hgVai/libifyMe.c to lib/hAnno.c in anticipationof sharing code with hgAi.  Also added hAnnoGetAutoSqlForTdb for hgAi.

diff --git src/hg/hgVai/libifyMe.h src/hg/hgVai/libifyMe.h
index 6ca5f01..32a1e65 100644
--- src/hg/hgVai/libifyMe.h
+++ src/hg/hgVai/libifyMe.h
@@ -1,44 +1,23 @@
 /* Stuff lifted from hgTables that should be libified. */
 
 /* Copyright (C) 2013 The Regents of the University of California 
  * See README in this or parent directory for licensing information. */
 
 #ifndef LIBIFYME_H
 #define LIBIFYME_H
 
 #include "annoFormatVep.h"
 #include "annoStreamVcf.h"
 #include "annoGrator.h"
 
 boolean lookupPosition(struct cart *cart, char *cartVar);
 /* Look up position if it is not already seq:start-end.
  * Return FALSE if it has written out HTML showing multiple search results.
  * If webGotWarnings() is true after this returns FALSE, no match was found
  * and a warning box was displayed, in which case it's good to reset position
  * to cart's lastPosition before proceeding. */
 
-boolean hasCustomTracks(struct cart *cart);
-/* Return TRUE if cart has custom tracks for the current db. */
-
 void nbSpaces(int count);
 /* Print some non-breaking spaces. */
 
-struct annoAssembly *getAnnoAssembly(char *db);
-/* Make annoAssembly for db. */
-
-struct annoStreamer *streamerFromTrack(struct annoAssembly *assembly, char *selTable,
-				       struct trackDb *tdb, char *chrom, int maxOutRows);
-/* Figure out the source and type of data and make an annoStreamer. */
-
-struct annoGrator *gratorFromBigDataFileOrUrl(char *fileOrUrl, struct annoAssembly *assembly,
-					      int maxOutRows, enum annoGratorOverlap overlapRule);
-/* Determine what kind of big data file/url we have, make an annoStreamer & in annoGrator. */
-
-struct annoGrator *gratorFromTrackDb(struct annoAssembly *assembly, char *selTable,
-				     struct trackDb *tdb, char *chrom, int maxOutRows,
-				     struct asObject *primaryAsObj,
-				     enum annoGratorOverlap overlapRule);
-/* Figure out the source and type of data, make an annoStreamer & wrap in annoGrator.
- * If not NULL, primaryAsObj is used to determine whether we can make an annoGratorGpVar. */
-
 #endif//ndef LIBIFYME_H