d1aafb0904765d2abfbb8b7eb92826460962b0ed
angie
  Fri May 1 16:26:50 2015 -0700
Libifying hgTables' code that parses user's region input, so I can use
it to add support for user regions to hgIntegrator.
refs #14579

diff --git src/hg/lib/makefile src/hg/lib/makefile
index bc296a7..0907314 100644
--- src/hg/lib/makefile
+++ src/hg/lib/makefile
@@ -100,31 +100,31 @@
     switchDbTss.o synMap.o synteny100000.o syntenyBerk.o syntenySanger.o \
     sqlProg.o tfbsCons.o tfbsConsSites.o tablesTables.o \
     tableDescriptions.o tableStatus.o targetDb.o tfbsConsMap.o \
     taxonDivision.o taxonGeneticCode.o taxonName.o taxonNode.o taxonXref.o \
     tigrCmrGene.o tigrOperon.o tilingPath.o traceInfo.o trackDb.o \
     trackDbCustom.o trackHub.o trackHubCheck.o trackLayout.o trackTable.o trackVersion.o trashDir.o \
     transRegCode.o transRegCodeCondition.o \
     transRegCodeProbe.o txCluster.o txCommon.o txEdgeBed.o \
     txEdgeOrtho.o txGraph.o txInfo.o txRnaAccs.o ucscRetroInfo.o ucscRetroOrtho.o \
     validateGisaid.o variant.o vcfUi.o vegaInfo.o vegaInfoZfish.o visiGene.o vntr.o \
     wabAli.o web.o ncRna.o wgRna.o wigAsciiToBinary.o wigDataStream.o wiggle.o \
     wiggleCart.o wiggleUtils.o wikiLink.o wikiTrack.o yaleGencodeAssoc.o \
     zdobnovSynt.o oreganno.o \
     oregannoUi.o gvUi.o gv.o omicia.o protVar.o pgSnp.o \
     alignInfo.o cddInfo.o loweutils.o cddDesc.o arCOGs.o arcogdesc.o geneTree.o \
-    megablastInfo.o pgPhenoAssoc.o pgSiftPred.o pgPolyphenPred.o variome.o
+    megablastInfo.o pgPhenoAssoc.o pgSiftPred.o pgPolyphenPred.o userRegions.o variome.o
 
 ifeq (${GBROWSE}, 1)
   GBROWSE_D=-DGBROWSE
 else
   GBROWSE_D=
 endif
 
 %.o: %.c
 	${CC} ${COPT} ${CFLAGS} ${GBROWSE_D} ${LOWELAB_DEFS} ${HG_DEFS} ${HG_WARN} ${HG_INC} ${XINC} -o $@ -c $<
 
 ../../lib/$(MACHTYPE)/jkhgap.a: $(O)
 	ar rcus ../../lib/$(MACHTYPE)/jkhgap.a $(O)
 
 clean:
 	rm -f $(O);