56dbb89571a671f50fb7723ff0e0f828baa98c1b braney Tue Apr 28 13:48:45 2015 -0700 collect CDS frame information for Gencode knownGene refs #14639 diff --git src/hg/lib/knownCds.as src/hg/lib/knownCds.as new file mode 100644 index 0000000..2f56e3e --- /dev/null +++ src/hg/lib/knownCds.as @@ -0,0 +1,10 @@ +table knownCds +"The CDS part of a genePredExt." + ( + string name; "Name of gene" + string cdsStartStat; "enum('none','unk','incmpl','cmpl')" + string cdsEndStat; "enum('none','unk','incmpl','cmpl')" + uint exonCount; "number of exons" + int[exonCount] exonFrames; "Exon frame {0,1,2}, or -1 if no frame for exon" + ) +