56dbb89571a671f50fb7723ff0e0f828baa98c1b
braney
  Tue Apr 28 13:48:45 2015 -0700
collect CDS frame information for Gencode knownGene refs #14639

diff --git src/hg/lib/knownCds.sql src/hg/lib/knownCds.sql
new file mode 100644
index 0000000..e96c0d7
--- /dev/null
+++ src/hg/lib/knownCds.sql
@@ -0,0 +1,15 @@
+# knownCds.sql was originally generated by the autoSql program, which also 
+# generated knownCds.c and knownCds.h.  This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly 
+# automatic way.
+
+#The CDS part of a genePredExt.
+CREATE TABLE knownCds (
+    name varchar(255) not null,	# Name of gene
+    cdsStartStat varchar(255) not null,	# enum('none','unk','incmpl','cmpl')
+    cdsEndStat varchar(255) not null,	# enum('none','unk','incmpl','cmpl')
+    exonCount int unsigned not null,	# number of exons
+    exonFrames longblob not null,	# Exon frame {0,1,2}, or -1 if no frame for exon
+              #Indices
+    PRIMARY KEY(name)
+);