Commits for angie

v317_preview2 to v317_base (2015-05-25 to 2015-06-01) v317

• Updating hg/lib/tests annoGrator files for some recent(ish) changes: full source name in header,
  wiggle chrom shown by default in addition to start and end, and wiggle average shown instead of
  comma-sep list in tab-sep output.
  refs #14579
  
  • src/hg/lib/tests/expected/annoGrator/bigBedToTabOut.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/pgSnpDbToTabOut.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/pgSnpKgDbToGpFx.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/pgSnpKgDbToTabOutShort.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/snpBigWigToTabOut.txt - lines changed 288, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/snpConsDbToTabOutShort.txt - lines changed 38, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/vcfEx1.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/tests/expected/annoGrator/vcfEx2.txt - lines changed 1, context: html, text, full: html, text
• In order to make it more clear that wiggle values are averaged now,
  print out wiggle's value column as "valueAverage" in the header.
  refs #14579 note 61
  
  • src/lib/annoFormatTab.c - lines changed 18, context: html, text, full: html, text
• Don't restrict hgIntegrator to private hosts anymore -- we're going to release it!
  refs #14579
  
  • src/hg/lib/web.c - lines changed 2, context: html, text, full: html, text
• Moving the 'quick-reference' contents of hgIntegratorHelp.html to
  hgIntegrator.jsx so Matt can write a proper user's guide in
  hgIntegratorHelp.html. Also, now we don't need to fetch html
  from the server and use React's dangerouslySetInnerHTML.
  refs #14579 note 65
  
  • src/hg/htdocs/goldenPath/help/hgIntegratorHelp.html - lines changed 56, context: html, text, full: html, text
  • src/hg/js/model/hgIntegrator/hgIntegratorModel.js - lines changed 5, context: html, text, full: html, text
  • src/hg/js/react/hgIntegrator/hgIntegrator.jsx - lines changed 84, context: html, text, full: html, text
• Fixed wacky scrolling behavior in pop-up dialog (Modal).
  refs #14579 note 68
  
  • src/hg/js/react/lib/Modal.jsx - lines changed 8, context: html, text, full: html, text
• When pop-up/Modal closes, return to the original page scroll height
  in case the user has scrolled way down while viewing the Modal.
  refs #14579 note 54
  
  • src/hg/js/react/lib/Modal.jsx - lines changed 6, context: html, text, full: html, text