ee4112cdcbb55495fac87b26cb9c77ab57baea79
ceisenhart
  Thu May 14 11:55:50 2015 -0700
Some basic notes about the assignment, I am piping stats directly into the file, and worry it will be overwritten. Hence, git

diff --git cirmNotes.txt cirmNotes.txt
new file mode 100644
index 0000000..279cf26
--- /dev/null
+++ cirmNotes.txt
@@ -0,0 +1,18 @@
+There is one file per cell, this many cells
+   1,047    1047   52528
+there are this many transcripts per file
+ 173,260  866300 5352029 A43D1_1_1_L13_C17_IL3545-708-503/abundance.txt
+Therefore an expected 181,403,220 exp scores
+there are this many lines total with a actual expression score
+  14,794,718   88768308 1244772164 allNonNull.txt
+around 8 % of the scores are non 0 
+
+Need to identify a common intersection of the 173,260 transcripts across the 1,047 cell
+lines
+
+Each cell line has a .txt file that stores the information as a tab
+deliminated table. Each row corresponds to a single transcript
+GOAL: Identify the rows that have a score across all cell lines 
+Picking a random file it has this many rows with 0 in them, 
+172756
+and therefore this many rows without 0, 504