File Changes for angie

v318_base to v319_preview (2015-06-22 to 2015-06-29) v319

• src/hg/hgIntegrator/hgIntegrator.c
  • lines changed 4, context: html, text, full: html, text
    Adding copyright boilerplate.
    
• src/hg/js/external/makefile
  • lines changed 2, context: html, text, full: html, text
    When using https, FaceBook's URL for React JS redirects to an http URL
    and the browser refuses to fetch from another site using http when the
    page is https. So don't rely on FaceBook's network, just host the
    React JS locally.
    refs #15557
    
• src/hg/js/external/react-with-addons-0.12.2.min.js
  • lines changed 0, context: html, text, full: html, text
    When using https, FaceBook's URL for React JS redirects to an http URL
    and the browser refuses to fetch from another site using http when the
    page is https. So don't rely on FaceBook's network, just host the
    React JS locally.
    refs #15557
    
• src/hg/js/model/lib/cart.js
  • lines changed 9, context: html, text, full: html, text
    For ease of command-line debugging, console.log the CGI param string
    (that would have been in the GET URL) when POSTing an ajax request.
    
• src/hg/lib/jsHelper.c
  • lines changed 1, context: html, text, full: html, text
    When using https, FaceBook's URL for React JS redirects to an http URL
    and the browser refuses to fetch from another site using http when the
    page is https. So don't rely on FaceBook's network, just host the
    React JS locally.
    refs #15557
    
• src/hg/makeDb/trackDb/fugu/fr1/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    Correcting the trackDb type of genomicSuperDups: it is 'bed 6 +' not
    'bed 6 .'. hgTracks and hgc didn't rely on tdb->type because they
    recognized the table name genomicSuperDups. hgTables used the
    tableDescriptions table instead. hg/lib/hAnno.c looks at tdb->type
    first to save the time of looking it up in tableDescriptions, and "."
    tells it that there are no more fields after the bed fields.
    refs #15610
    
• src/hg/makeDb/trackDb/human/hg15/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    Correcting the trackDb type of genomicSuperDups: it is 'bed 6 +' not
    'bed 6 .'. hgTracks and hgc didn't rely on tdb->type because they
    recognized the table name genomicSuperDups. hgTables used the
    tableDescriptions table instead. hg/lib/hAnno.c looks at tdb->type
    first to save the time of looking it up in tableDescriptions, and "."
    tells it that there are no more fields after the bed fields.
    refs #15610
    
• src/hg/makeDb/trackDb/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    Correcting the trackDb type of genomicSuperDups: it is 'bed 6 +' not
    'bed 6 .'. hgTracks and hgc didn't rely on tdb->type because they
    recognized the table name genomicSuperDups. hgTables used the
    tableDescriptions table instead. hg/lib/hAnno.c looks at tdb->type
    first to save the time of looking it up in tableDescriptions, and "."
    tells it that there are no more fields after the bed fields.
    refs #15610
    
  • lines changed 2, context: html, text, full: html, text
    Found a couple more instances where 'bed N .' was used but 'bed N +' should
    be used because there are extra fields.
    refs #15610