c6e87080331a04c175b3b21d74385f5d40405962 ceisenhart Fri Jul 17 09:42:07 2015 -0700 removing an uncessary file that worked its way into the repo diff --git cirmNotes.txt cirmNotes.txt deleted file mode 100644 index 279cf26..0000000 --- cirmNotes.txt +++ /dev/null @@ -1,18 +0,0 @@ -There is one file per cell, this many cells - 1,047 1047 52528 -there are this many transcripts per file - 173,260 866300 5352029 A43D1_1_1_L13_C17_IL3545-708-503/abundance.txt -Therefore an expected 181,403,220 exp scores -there are this many lines total with a actual expression score - 14,794,718 88768308 1244772164 allNonNull.txt -around 8 % of the scores are non 0 - -Need to identify a common intersection of the 173,260 transcripts across the 1,047 cell -lines - -Each cell line has a .txt file that stores the information as a tab -deliminated table. Each row corresponds to a single transcript -GOAL: Identify the rows that have a score across all cell lines -Picking a random file it has this many rows with 0 in them, -172756 -and therefore this many rows without 0, 504