File Changes for angie
switch to commits view, user indexv322_preview to v322_preview2 (2015-08-31 to 2015-09-07) v322
- src/hg/hgTracks/extTools.c
- lines changed 8, context: html, text, full: html, text
Check whether local file "extTools.ra" exists before calling printExtMenuData and showing the keyboard shortcuts for it.
- src/hg/hgTracks/extTools.h
- lines changed 3, context: html, text, full: html, text
Check whether local file "extTools.ra" exists before calling printExtMenuData and showing the keyboard shortcuts for it.
- src/hg/hgTracks/hgTracks.c
- lines changed 9, context: html, text, full: html, text
Check whether local file "extTools.ra" exists before calling printExtMenuData and showing the keyboard shortcuts for it.
- src/hg/hgTracks/simpleTracks.c
- lines changed 30, context: html, text, full: html, text
Look for trackDbSetting "trackHandler" in lookupTrackHandler instead of looking it up at the end of lookupTrackHandlerClosestToHome after modifying tdb. That was losing child trackHandler settings.
- src/hg/js/install.mk
- lines changed 7, context: html, text, full: html, text
Added 'top' target for faster development of top-level .js files
(i.e. skip all of the new subdirs).
- src/hg/js/makefile
- lines changed 4, context: html, text, full: html, text
Added 'top' target for faster development of top-level .js files
(i.e. skip all of the new subdirs).
- src/hg/lib/annoStreamDb.c
- lines changed 41, context: html, text, full: html, text
Discard large-bin items that fall on or after nextChunkStart because they
will break the (chrom, chromStart) sorting order if they are also to the
right of small-bin items on or after nextChunkStart -- and they will appear
again in the next chunk of rows.
Also a couple other fixes for problems found while debugging:
- there was a spot where I forgot to restart merging after calling
resetMergeState (when moving on to the next chrom in a genome-wide query)
- in mergeRow, don't resetMergeState until both big and small queues are empty
refs #15953
- src/hg/makeDb/trackDb/human/trackDb.ra
- lines changed 4, context: html, text, full: html, text
Add trackHandler settings for snp144* tracks.
- src/lib/annoGrateWig.c
- lines changed 25, context: html, text, full: html, text
If querying in a region, restrict wiggle values to the part of the region
that overlaps the primary item, don't just use the bounds of the db rows
that overlap start/end of region.
fixes #15952
- src/lib/annoGrator.c
- lines changed 1, context: html, text, full: html, text
If querying in a region, restrict wiggle values to the part of the region
that overlaps the primary item, don't just use the bounds of the db rows
that overlap start/end of region.
fixes #15952
- src/utils/bigWigMerge/tests/makefile
- lines changed 4, context: html, text, full: html, text
Set verbose level to 0 so we don't get informational messages cluttering up stderr.
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