3a63c684fc647b345d52e96147b3344453b3d28a kate Fri Jul 31 10:12:14 2015 -0700 1. Fix tissue ordering problem (hgGtex). 2. Add stats table (rename gtexTissueData to gtexTissueMedian and use gtexTissueData for stats. 3. Extend gtexInfo table.refs #15645 diff --git src/hg/lib/gtexTissueMedian.sql src/hg/lib/gtexTissueMedian.sql new file mode 100644 index 0000000..6f3bf90 --- /dev/null +++ src/hg/lib/gtexTissueMedian.sql @@ -0,0 +1,13 @@ +# gtexTissueMedian.sql was originally generated by the autoSql program, which also +# generated gtexTissueMedian.c and gtexTissueMedian.h. This creates the database representation of +# an object which can be loaded and saved from RAM in a fairly +# automatic way. + +#GTEX Expression median level by tissue (RPKM levels, unmapped) +CREATE TABLE gtexTissueMedian ( + geneId varchar(255) not null, # Gene identifier (ensembl) + tissueCount int unsigned not null, # Number of tissues + scores longblob not null, # RPKM median expression levels + #Indices + PRIMARY KEY(geneId) +);