9830b80b258f9942c5c5ed6c264fc827efdd0fad brianlee Tue Oct 6 14:36:09 2015 -0700 Commenting out a stanza in extTools.ra to remove CRISPOR tool refs #16160 diff --git src/hg/hgTracks/extTools.ra src/hg/hgTracks/extTools.ra index cba8764..aec8692 100644 --- src/hg/hgTracks/extTools.ra +++ src/hg/hgTracks/extTools.ra @@ -315,39 +315,39 @@ #longLabel Search for transcription factor binding sites #url http://the_brain.bwh.harvard.edu/uniprobe/browse.php #email uniprobe@genetics.med.harvard.edu #maxSize 80 #param MAX_FILE_SIZE 2097152 #param dnaSpeciesFormat all #param dnaThreshold 0.45 #param dnaSpeciesTextArea #param dnaSpeciesSingle Acanthamoeba castellanii #param dnaTextarea $seq #param searchParam #param dnaSpeciesCategory Acanthamoeba castellanii,Allomyces macrogynus,Ashbya gossypii,Arabidopsis thaliana,Aspergillus nidulans,Caenorhabditis elegans,Cryptosporidium parvum,Drosophila melanogaster,Homo sapiens,Kluyveromyces lactis,Monosiga brevicollis,Mus musculus,Mycosphaerella graminicola,Nematostella vectensis,Patiria miniata,Plasmodium falciparum,Saccharomyces cerevisiae,Strongylocentrotus purpuratus,Trichoplax adhaerens,Tuber melanosporum #param dnaFile #param dnaFormat textarea -tool crispor -url http://tefor.net/crisporMax/crispor.cgi -email services@tefor.net -shortLabel CRISPOR -longLabel CRISPR/Cas9 target selector: off-target and activity predictions, primer design -param org $db -param pos $position -param pam NGG -maxSize 1000 +#tool crispor +#url http://tefor.net/crisporMax/crispor.cgi +#email services@tefor.net +#shortLabel CRISPOR +#longLabel CRISPR/Cas9 target selector: off-target and activity predictions, primer design +#param org $db +#param pos $position +#param pam NGG +#maxSize 1000 tool chopchop url https://chopchop.rc.fas.harvard.edu/search.php email tessa.montague@gmail.com shortLabel CHOPCHOP longLabel CRISPR/Cas9 off-target predictions maxSize 2000 onlyDbs anoGam1,ce10,dm3,hg19,hg38,danRer7,galGal4,gasAcu1,mm10,musFur1,rn6,oryLat2,sacCer3,xenTro3 param organism $db param pasteSeq $seq param position $position param method CRISPR param target CODING param subsetExon param padding