ff9313091f342ffe62a124427b5c9d6a516faaea hiram Thu Oct 15 15:03:07 2015 -0700 fixup gcc warnings for -Wunused-but-set-variable refs #16121 diff --git src/hg/hgc/virusClick.c src/hg/hgc/virusClick.c index 19e8616..926d797 100644 --- src/hg/hgc/virusClick.c +++ src/hg/hgc/virusClick.c @@ -197,54 +197,54 @@ if (system(cmd) != 0) errAbort("creation of 3D structure highlight files failed: %s", cmd); // output names are all predefined by script relative to prefix tempNameFromPrefix(imageFile, &prefix, "_highlight.jpg"); tempNameFromPrefix(chimeraScript, &prefix, "_highlight.cmd"); } static void showProtH1n1(char *item, char *geneSymbol) { char query2[256]; struct sqlResult *sr2; char **row2; struct sqlConnection *conn2 = hAllocConn(database); -char *subjId, *dnaSeqId; +// char *subjId, *dnaSeqId; unused variable char *aaSeqId= NULL; char *gene=NULL; char cond_str[256]; char *predFN; char *homologID; char *SCOPdomain; char *chain; char goodSCOPdomain[40]; int first = 1; float eValue; char *chp; int homologCount; int gotPDBFile = 0; sqlSafef(query2, sizeof(query2), "select subjId, dnaSeqId, aaSeqId, gene from gisaidXref where dnaSeqId='%s'", item); sr2 = sqlMustGetResult(conn2, query2); row2 = sqlNextRow(sr2); if (row2 != NULL) { - subjId = strdup(row2[0]); - dnaSeqId = strdup(row2[1]); +// subjId = strdup(row2[0]); unused variable +// dnaSeqId = strdup(row2[1]); unused variable aaSeqId = strdup(row2[2]); gene = strdup(row2[3]); } else { errAbort("%s not found.", item); } sqlFreeResult(&sr2); printf("

Protein Structure Analysis and Prediction

"); printf("Comparison to 1918 Flu Virus: "); printf("%s
\n", aaSeqId);