987241ea99c99b93aea51bb63bdf579f927e9d2b
kent
  Wed Oct 7 13:46:09 2015 -0700
Fixing copyright on some old essentially public domain files.

diff --git src/inc/gdf.h src/inc/gdf.h
index 07380df..2aae163 100644
--- src/inc/gdf.h
+++ src/inc/gdf.h
@@ -1,61 +1,60 @@
-/*****************************************************************************
- * Copyright (C) 2000 Jim Kent.  This source code may be freely used         *
- * for personal, academic, and non-profit purposes.  Commercial use          *
- * permitted only by explicit agreement with Jim Kent (jim_kent@pacbell.net) *
- *****************************************************************************/
-/* gdf - Intronerator Gene Description File. */
+/* gdf - Intronerator Gene Description File. 
+ *
+ * This file is copyright 2000 Jim Kent, but license is hereby
+ * granted for all use - public, private or commercial. */
+
 
 #ifndef GDF_H
 #define GDF_H
 
 #ifndef DNAUTIL_H
 #include "dnautil.h"
 #endif
 
 struct gdfDataPoint
 /* This stores data at each exon/intron boundary. */
     {
     int start;
     };
 
 struct gdfGene
 /* One structure of these for each gene (each isoform of each gene
  * actually. */
     {
     struct gdfGene *next;
     char *name;
     int dataCount;
     struct gdfDataPoint *dataPoints;
     char strand;
     UBYTE chromIx;
     };
 
 struct gdfGene *newGdfGene(char *name, int nameSize, int exonCount, char strand, UBYTE chromIx);
 /* Return a new gene. */
 
 void gdfFreeGene(struct gdfGene *gene);
 /* Free a gene. */
 
 void gdfFreeGeneList(struct gdfGene **pList);
 /* Free a whole list of genes. */
 
 struct gdfGene *gdfReadOneGene(FILE *f);
 /* Read one entry from a Gdf file.  Assumes that the file pointer
  * is in the right place. */
 
 void gdfGeneExtents(struct gdfGene *gene, long *pMin, long *pMax);
 /* Figure out first and last base in gene. */
 
 void gdfOffsetGene(struct gdfGene *gene, int offset);
 /* Add offset to each point in gene */
 
 void gdfRcGene(struct gdfGene *gene, int size);
 /* Flip gene to other strand. Assumes dataPoints are already
  * moved into range from 0-size */
 
 void gdfUpcExons(struct gdfGene *gene, int geneOffset, DNA *dna, int dnaSize, int dnaOffset);
 /* Uppercase exons in DNA. */
 
 
 #endif /* GDF_H */