Commits for jcasper

v325_base to v326_preview (2015-11-16 to 2015-11-23) v326

• Beginning work on hg38p5, refs #16261
  
  • src/hg/makeDb/doc/hg38/hg38Patch5.txt - lines changed 2, context: html, text, full: html, text
• Enlarging buffers to prevent overflow, refs #13549
  
  • src/hg/lib/cart.c - lines changed 2, context: html, text, full: html, text
• Fix for issue where gsBig failed to merge segments after it had skipped over one containing all Ns, refs #16220
  
  • src/hg/gsBig/gsBig.c - lines changed 4, context: html, text, full: html, text
• Changing who gets errors from the ISCA build process
  
  • src/hg/utils/otto/isca/iscaWrapper.sh - lines changed 1, context: html, text, full: html, text
• Fixing typo in file name, refs #16220
  
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 1, context: html, text, full: html, text
• Scripts and documentation for adding ISCA Benign cumulative gain/loss tracks, refs #16122
  
  • src/hg/makeDb/doc/hg19.txt - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/iscaComposite.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/iscaCompositeOld.html - lines changed 146, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 32, context: html, text, full: html, text
  • src/hg/utils/otto/isca/buildISCA.csh - lines changed 10, context: html, text, full: html, text
  • src/hg/utils/otto/isca/isca.tables - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/otto/isca/validateISCA.sh - lines changed 2, context: html, text, full: html, text
• Fixing file location mistake, refs #16220
  
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 1, context: html, text, full: html, text
• Adding gorGor4 to all.joiner, refs #16220
  
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Making buf size into #def, upsizing another buffer, refs #16406
  
  • src/inc/net.h - lines changed 1, context: html, text, full: html, text
  • src/lib/net.c - lines changed 2, context: html, text, full: html, text