d64ef3a16ad7c8648a09eb4401c3c92a65b085aa
hiram
  Wed Nov 25 11:40:18 2015 -0800
fixup gcc warnings for -Wunused-but-set-variable refs #16121

diff --git src/hg/fqToQac/fqToQac.c src/hg/fqToQac/fqToQac.c
index fece771..e73a000 100644
--- src/hg/fqToQac/fqToQac.c
+++ src/hg/fqToQac/fqToQac.c
@@ -41,46 +41,46 @@
  "uncompressed with qacToQa.");
 }
 
 void fqToQa(struct lineFile *in, char *outDir)
 /* fqToQa - convert from fq format with one big file to
  * format with one file per clone. */
 {
 FILE *out = NULL;
 char ucscName[128];
 char path[512];
 static char lastPath[512];
 char *gsName;
 int outFileCount = 0;
 struct hash *uniqClone = newHash(16);
 struct hash *uniqFrag = newHash(19);
-boolean ignore = FALSE;
+// boolean ignore = FALSE;  unused
 struct qaSeq qa;
 
 makeDir(outDir);
 errLog = mustOpen("fqToQa.err", "w");
 pushWarnHandler(warnHandler);
 printf("Converting %s", in->fileName);
 fflush(stdout);
 
 while (qaFastReadNext(in, &qa.qa, &qa.size, &gsName))
     {
     gsToUcsc(gsName, ucscName);
     qa.name = ucscName;
     if (hashLookup(uniqFrag, ucscName))
 	{
-	ignore = TRUE;
+//	ignore = TRUE;  unused
 	warn("Duplicate %s in %s, ignoring all but first",
 	    ucscName, in->fileName);
         continue;
 	}
     else
 	{
 	hashAdd(uniqFrag, ucscName, NULL);
 	}
     faRecNameToQacFileName(outDir, ucscName, path);
     if (!sameString(path, lastPath))
 	{
 	strcpy(lastPath, path);
 	carefulClose(&out);
 	if (hashLookup(uniqClone, path))
 	    {