3db237ff65edd8bfc52f4b22088feb2acbc78bd0 mspeir Tue Nov 24 11:32:18 2015 -0800 Correcting spelling mistakes in usage and error messages, refs #14062 diff --git src/hg/pslCrudeCmp/pslCrudeCmp.c src/hg/pslCrudeCmp/pslCrudeCmp.c index f2b8fd3..130ec71 100644 --- src/hg/pslCrudeCmp/pslCrudeCmp.c +++ src/hg/pslCrudeCmp/pslCrudeCmp.c @@ -9,32 +9,32 @@ /* output files */ FILE *only1Fh = NULL; FILE *only2Fh = NULL; FILE *better1Fh = NULL; FILE *better2Fh = NULL; FILE *sameFh = NULL; void usage() /* Explain usage and exit. */ { errAbort( "pslCrudeCmp - Crudely compare two psl files\n" "usage:\n" " pslCrudeCmp 1.psl 2.psl\n" "options:\n" - " -only1=file - Write PSLs occuring only in the 1.psl to this file.\n" - " -only2=file - Write PSLs occuring only in the 2.psl to this file.\n" + " -only1=file - Write PSLs occurring only in the 1.psl to this file.\n" + " -only2=file - Write PSLs occurring only in the 2.psl to this file.\n" " -better1=file - Write PSLs that are better in 1.psl to this file.\n" " -better2=file - Write PSLs that are better in 2.psl to this file.\n" " -same=file - Write PSLs that are the same in both files to this file.\n" ); } int scorePsl(struct psl *psl) /* Return a score for .psl */ { int score = 1*psl->match + 1*psl->repMatch - 2*psl->misMatch; int tGap, qGap; int i, count = psl->blockCount; for (i=1; i