206a5cc77acc8a735fd691850248c09a3afb4d97 mspeir Thu Jan 7 11:07:01 2016 -0800 Changes based on CR, refs #16596 diff --git src/hg/htdocs/indexNews.html src/hg/htdocs/indexNews.html index caadc19..ee1c3f5 100755 --- src/hg/htdocs/indexNews.html +++ src/hg/htdocs/indexNews.html @@ -50,31 +50,31 @@ <p> A Genome Browser is now available for the frog (<em>Xenopus tropicalis</em>) assembly released September 2012 by the <a href="http://genome.jgi.doe.gov/" target="_blank">US DOE Joint Genome Institute (JGI-PGF)</a> (JGI v7.0, UCSC version xenTro7). For more information and statistics about this assembly, see the NCBI assembly record for <a href="http://www.ncbi.nlm.nih.gov/assembly/515038" target="_blank"> Xtropicalis_v7</a>. There are 7,728 scaffolds with a total size of 1,437,530,879 bases. </p> <p> Bulk downloads of the sequence and annotation data may be obtained from the Genome Browser <a href="ftp://hgdownload.soe.ucsc.edu/goldenPath/xenTro7/">FTP server</a> or the <a href="http://hgdownload.soe.ucsc.edu/downloads.html#xentro">Downloads</a> page. - Please observe the <a href="goldenPath/credits.html#xentro_credits">conditions for use</a> when + Please observe the <a href="goldenPath/credits.html#xentro_use">conditions for use</a> when accessing and using these data sets. The annotation tracks for this browser were generated by UCSC and collaborators woldwide. See the <a href="goldenPath/credits.html#xentro_credits">Credits</a> page for a detailed list of the organizations and individuals who contributed to this release. </p> --- <p> A Genome Browser is now available for the cat (<em>Felis catus</em>) assembly released November 2014 by the International Cat Genome Sequencing Consortium (ICGSC version Felis_catus_8.0, UCSC version felCat8). For more information and statistics about this assembly, see the NCBI assembly record for <a href="http://www.ncbi.nlm.nih.gov/assembly/1373248" target="_blank"> Felis_catus_8.0</a>. There are 267,625 scaffolds with a total size of 2,641,342,258 bases. </p> @@ -94,31 +94,31 @@ <p> <font color="#006666" size="4"><b>16 December 2015 — Output from Related Tables Now Available in the Data Integrator</b></font> <p> In the UCSC Genome Browser database, detailed information on the annotations for many tracks is stored in extra tables. This information can include things such as identifiers in other databases, transcript status, or other descriptive information. You can now obtain data from these related tables in your output from the <a href="cgi-bin/hgIntegrator">Data Integrator</a>. </p> <p> To add related tables to your Data Integrator output, first, select and add at least one track to your data sources. Then, scroll down to the "Output Options" section and click the <button type="button">Choose fields</button> button. - Lastly, at the bottom the section for each selected track, you will see a drop-down menu + Lastly, at the bottom of the section for each selected track, you will see a drop-down menu labeled "Related tables" which allows you to select and add various tables to your output. <p><img style="border: 1px solid black; display: block;" src="images/hgIntegratorRelatedTablesAnnouncement.png"> <p> For more information about using the Data Integrator, please see the <a href="goldenPath/help/hgIntegratorHelp.html">User Guide</a>. </p> <p> Thank you to Angie Hinrichs and Matthew Speir for their work on this feature. </p> <hr> <!-- start archives -->