56c1f0822c181598d6946745d17c348ed8c148e4
angie
  Fri Dec 11 11:55:07 2015 -0800
Sequence Ontology name change: non_coding_exon_variant --> non_coding_transcript_exon_variant.

diff --git src/hg/lib/soTerm.c src/hg/lib/soTerm.c
index b3a6ab2..4c8baca 100644
--- src/hg/lib/soTerm.c
+++ src/hg/lib/soTerm.c
@@ -1,47 +1,47 @@
 /* soTerm - Sequence Ontology terms that we use for compatibility with Ensembl & others. */
 
 /* Copyright (C) 2014 The Regents of the University of California 
  * See README in this or parent directory for licensing information. */
 
 #include "common.h"
 #include "soTerm.h"
 
 char *soTermToString(enum soTerm termNumber)
 /* Translate termNumber to its string equivalent.  Do not modify or free result. */
 {
 switch (termNumber)
     {
     case regulatory_region_variant : return "regulatory_region_variant"; break;
     case stop_retained_variant : return "stop_retained_variant"; break;
     case exon_loss : return "exon_loss"; break;
     case splice_acceptor_variant : return "splice_acceptor_variant"; break;
     case splice_donor_variant : return "splice_donor_variant"; break;
     case complex_transcript_variant : return "complex_transcript_variant"; break;
     case stop_lost : return "stop_lost"; break;
     case coding_sequence_variant : return "coding_sequence_variant"; break;
     case initiator_codon_variant : return "initiator_codon_variant"; break;
     case missense_variant : return "missense_variant"; break;
     case stop_gained : return "stop_gained"; break;
     case frameshift_variant : return "frameshift_variant"; break;
     case nc_transcript_variant : return "nc_transcript_variant"; break;
     case mature_miRNA_variant : return "mature_miRNA_variant"; break;
     case NMD_transcript_variant : return "NMD_transcript_variant"; break;
     case _5_prime_UTR_variant : return "5_prime_UTR_variant"; break;
     case _3_prime_UTR_variant : return "3_prime_UTR_variant"; break;
     case incomplete_terminal_codon_variant : return "incomplete_terminal_codon_variant"; break;
     case intron_variant : return "intron_variant"; break;
     case intergenic_variant : return "intergenic_variant"; break;
     case splice_region_variant : return "splice_region_variant"; break;
     case upstream_gene_variant : return "upstream_gene_variant"; break;
     case downstream_gene_variant : return "downstream_gene_variant"; break;
     case TF_binding_site_variant : return "TF_binding_site_variant"; break;
-    case non_coding_exon_variant : return "non_coding_exon_variant"; break;
+    case non_coding_exon_variant : return "non_coding_transcript_exon_variant"; break;
     case protein_altering_variant : return "protein_altering_variant"; break;
     case synonymous_variant : return "synonymous_variant"; break;
     case inframe_deletion : return "inframe_deletion"; break;
     case inframe_insertion : return "inframe_insertion"; break;
     default:
 	errAbort("soTermToString: don't recognize term %u", termNumber);
     }
 return "ERROR"; // never get here
 }