0bdb0e42b90052c0ffd7c710ceb8d603cf27db48 galt Wed Jan 27 10:31:04 2016 -0800 Requested changes to multi-region config see # 16666 note 21 diff --git src/hg/hgTracks/simpleTracks.c src/hg/hgTracks/simpleTracks.c index ebbcb3b..da83a93 100644 --- src/hg/hgTracks/simpleTracks.c +++ src/hg/hgTracks/simpleTracks.c @@ -185,30 +185,31 @@ struct virtRegion *virtRegionList = NULL; // list of regions in virtual chrom struct virtChromRegionPos *virtChrom = NULL; // virtual chrom array of positions and regions int virtRegionCount = 0; // number of regions in virtual chromosome long virtSeqBaseCount = 0; // number of bases in virtual chromosome long virtWinBaseCount = 0; // number of bases in virtual chrom (end - start) long virtWinStart = 0; // start of virtual window in bases long virtWinEnd = 0; // end of virtual window in bases long defaultVirtWinStart = 0; // default start of virtual window in bases long defaultVirtWinEnd = 0; // default end of virtual window in bases //char *virtPosition = NULL; /* Name of virtual position. TODO REMOVE? */ char *virtChromName = NULL; /* Name of virtual chrom */ boolean virtMode = FALSE; /* Are we in virtual chrom mode? */ boolean virtChromChanged = FALSE; /* Has the virtChrom changed? */ boolean emAltHighlight = FALSE; /* Highlight alternativing regions in virt view? */ int emPadding = 6; /* # bases padding for exon-mostly regions */ +int gmPadding = 6; /* # bases padding for gene-mostly regions */ char *emGeneTable = NULL; /* Gene table to use for exon mostly */ struct track *emGeneTrack = NULL; /* Track for gene table for exon mostly */ struct rgbColor vertWindowSeparatorColor = { 255, 220, 220}; // light red char *multiRegionsBedUrl = ""; /* URL to Multi-window bed regions file */ // demo2 int demo2NumWindows = 70; int demo2WindowSize = 200; int demo2StepSize = 200; // singleTrans (single transcript) char *singleTransId = "uc001uub.1"; // singleAltHaplos (single haplotype) char *singleAltHaploId = "chr6_cox_hap2";