Commits for mspeir

v329_preview2 to v329_base (2016-02-22 to 2016-02-29) v329

• Updating links on ce11 gateway desc page. Turning ce11 gap track off by default, refs #15209
  
  • src/hg/makeDb/trackDb/worm/ce11/description.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce11/trackDb.ra - lines changed 1, context: html, text, full: html, text
• Updating reference for 2016 NAR Update paper. no redmine.
  
  • src/hg/htdocs/goldenPath/pubs.html - lines changed 4, context: html, text, full: html, text
• moving paper to new 2016 section. no redmine.
  
  • src/hg/htdocs/goldenPath/pubs.html - lines changed 26, context: html, text, full: html, text
• Adding comment about BLAT min lucky match to FAQ, refs #12166
  
  • src/hg/htdocs/FAQ/FAQblat.html - lines changed 5, context: html, text, full: html, text
• updating sentence about where we got the fishClones data, refs #15522
  
  • src/hg/makeDb/trackDb/fishClones.html - lines changed 7, context: html, text, full: html, text
• Setting dupeOk for fishClones-cloneEnd relationship. Making comment more descriptive. refs #15522
  
  • src/hg/makeDb/schema/all.joiner - lines changed 2, context: html, text, full: html, text
• Changing table format, rewording References section, refs #16648
  
  • src/hg/makeDb/trackDb/human/hg38/hg38Patch6.html - lines changed 5, context: html, text, full: html, text
• Add check to see if table update times are differen, and if so, output a little marker next the table. Update command line options so they don't accidentally stomp on each other, suggest in CR. Explain table list file names, suggested in CR. refs #16553 #16869
  
  • src/utils/qa/updateTimesDb.sh - lines changed 17, context: html, text, full: html, text
• Adding new updateTimesDb.sh script to makefile and removing old script, refs #16553
  
  • src/utils/qa/makefile - lines changed 1, context: html, text, full: html, text