33c3087e49e2af7bbad960879e12797933ea7ab5 kate Thu Feb 11 17:15:04 2016 -0800 Make GTEx V6 the default. refs #16545 diff --git src/hg/lib/gtexGeneBed.c src/hg/lib/gtexGeneBed.c index 267bab4..78e9239 100644 --- src/hg/lib/gtexGeneBed.c +++ src/hg/lib/gtexGeneBed.c @@ -200,22 +200,22 @@ " score int unsigned not null, # Score from 0-1000\n" " strand char(1) not null, # + or - for strand\n" " geneId varchar(255) not null, # Ensembl gene ID, referenced in GTEx data tables\n" " transcriptId varchar(255) not null, # Ensembl ID of Canonical transcript; determines genomic position\n" " transcriptClass varchar(255) not null, # GENCODE transcript class (coding, nonCoding, pseudo)\n" " expCount int unsigned not null, # Number of experiment values\n" " expScores longblob not null, # Comma separated list of experiment scores\n" "#Indices\n" " PRIMARY KEY(geneId)\n" ")\n", table); sqlRemakeTable(conn, table, query); } char *gtexVersionSuffix(char *table) -/* Return version string for a GTEx track table. For now, just supporting V4 (no suffix) and V6 */ +/* Return version string for a GTEx track table. For now, just supporting V4 and V6 (default, no suffix )*/ { -if (endsWith(table, "V6")) - return("V6"); +if (endsWith(table, "V4")) + return("V4"); return(""); }