33c3087e49e2af7bbad960879e12797933ea7ab5
kate
  Thu Feb 11 17:15:04 2016 -0800
Make GTEx V6 the default. refs #16545

diff --git src/hg/lib/gtexInfo.c src/hg/lib/gtexInfo.c
index e307845..ed99419 100644
--- src/hg/lib/gtexInfo.c
+++ src/hg/lib/gtexInfo.c
@@ -177,41 +177,40 @@
 {
 char query[1024];
 
 sqlSafef(query, sizeof(query),
 "CREATE TABLE %s (\n"
 "    version varchar(255) not null,	# GTEX data release (e.g. V4, V6)\n"
 "    releaseDate varchar(255) not null,	# Release date\n"
 "    maxScore double not null,	# Maximum score observed (use to scale display)\n"
 "    maxMedianScore double not null,	# Maximum score observed for a tissue median (use to scale display)\n"
 "        #Indices\n"
 "    PRIMARY KEY(version)\n"
 ")\n",   table);
 sqlRemakeTable(conn, table, query);
 }
 
+char *gtexVersion(char *table)
+/* Return version string based on table suffix */
+{
+char *suffix = gtexVersionSuffix(table);
+// Currently the V4 tables have no suffix
+return (sameString(suffix, "")) ? GTEX_DEFAULT_VERSION : suffix;
+}
+
 double gtexMaxMedianScore(char *version)
 /* Retrieve max median score for latest (or named) version */
 {
 char query[1024];
 struct sqlConnection *conn = hAllocConn("hgFixed");
 if (!conn)
     return 0;
 // TODO: trackDB setting for this
 if (!version || sameString(version, ""))
-    version = "V4";
+    version = GTEX_DEFAULT_VERSION;
 sqlSafef(query, sizeof query, "select maxMedianScore from gtexInfo where version='%s'", version);
 double score = sqlQuickDouble(conn, query);
 if (score == 0.0)
     errAbort("Internal error: GTEx version \"%s\" not found in gtexInfo table", version);
 hFreeConn(&conn);
 return score;
 }
-
-char *gtexVersion(char *table)
-/* Return version string based on table suffix */
-{
-char *suffix = gtexVersionSuffix(table);
-// Currently the V4 tables have no suffix
-return (sameString(suffix, "")) ? "V4" : suffix;
-}
-