Commits for angie

v330_preview2.1 to v330_base (2016-03-14 to 2016-03-21) v330

• Fixing typo in 1c23add1.
  refs #16910
  
  • src/hg/makeDb/doc/hg19.txt - lines changed 1, context: html, text, full: html, text
• Avoid non-existent directory error when running in -debug mode.
  
  • src/hg/utils/automation/doDbSnpMaskSequence.pl - lines changed 2, context: html, text, full: html, text
• Re-ran most of snp pipeline on hg19 after fixing bug in doDbSnp.pl; rebuilt snp ortho alleles and masked fasta.
  Ran snp pipeline on hg38 (using rs_fasta from hg19 because dbSNP dumped GRCh38 rs_fasta too soon and it was incomplete).
  refs #16777
  
  • src/hg/makeDb/doc/hg19.txt - lines changed 18, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg38/variation.txt - lines changed 86, context: html, text, full: html, text