5edc1e5bd8a53e7bb3c2943f73d745e3995d59d2 braney Thu Mar 17 10:10:14 2016 -0700 get ws245Genes to deal with its peptide table properly #15209 diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c index 0766f49..6dc64bc 100644 --- src/hg/hgc/hgc.c +++ src/hg/hgc/hgc.c @@ -2732,30 +2732,31 @@ { puts("<LI>\n"); hgcAnchorSomewhere(pepClick, pepName, pepTable, seqName); printf("Predicted Protein</A> \n"); puts("</LI>\n"); foundPep = TRUE; } if (!foundPep) { char *autoTranslate = trackDbSetting(tdb, "autoTranslate"); if (autoTranslate == NULL || differentString(autoTranslate, "0")) { puts("<LI>\n"); /* put out correct message to describe translated mRNA */ if ( sameString(geneTable, "ensGene") + || sameString(geneTable, "ws245Genes") || sameString(geneTable, "vegaGene") || sameString(geneTable, "vegaPseudoGene") || genbankIsRefSeqNonCodingMRnaAcc(geneName) || sameString(geneTable, "lincRNAsTranscripts") ) { printf("Non-protein coding gene or gene fragment, no protein prediction available."); } else { hgcAnchorSomewhere("htcTranslatedPredMRna", geneName, "translate", seqName); printf("Translated Protein</A> from "); if (sameString(geneTable, "refGene") ) { printf("genomic DNA\n"); }