ec2183ee82650cf882389251cb86403d67569f14 mspeir Fri Mar 11 07:41:02 2016 -0800 Minor correction to usage message. Added comment, refs #16553 diff --git src/utils/qa/updateTimesDb.sh src/utils/qa/updateTimesDb.sh index 90c7aa6..6d3b8d3 100755 --- src/utils/qa/updateTimesDb.sh +++ src/utils/qa/updateTimesDb.sh @@ -21,31 +21,31 @@ # updateTimesDb.csh # ############################ ##### Variables ##### # Set by command-line options dbDev="" dbBeta="" outputFiles=false ##### Functions ##### showHelp() { cat << EOF -Usage: $0 [-hbf] [-d DATABASE DEV] [-b DATABASE BETA] +Usage: $0 [-hf] [-d DATABASE DEV] [-b DATABASE BETA] -h Display this help and exit -d DATABASE DEV Database to check on Dev, e.g. hg19 or hg38. -b DATABASE BETA Database to check on Beta. -f Output lists of tables on Dev and Beta into files. Shows table update times for an entire database on Dev and Beta. If you wish to compare databases between the machines, use the -b option to specify the database on Beta. For example, to compare the same assembly on Dev and Beta updateTimesDb.sh -d ce10 @@ -70,30 +70,31 @@ } ##### Parse command-line input ##### OPTIND=1 # Reset is necessary if getopts was used previously in the script. # It is a good idea to make this local in a function. while getopts "hd:b:f" opt do case $opt in h) showHelp exit 0 ;; d) dbDev=$OPTARG + # Check if dbBeta is empty before trying to set it if [[ $dbBeta == "" ]] then dbBeta=$dbDev fi ;; b) dbBeta=$OPTARG ;; f) outputFiles=true ;; '?') showHelp >&2 exit 1 ;;